Author

Diane Esquerré

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 4

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Organism:chicken / avian· 1

Frequent Co-Authors

Gwenola Tosser‐KloppiD· 2 shared Philippe BardouiD· 2 shared Sandrine LagarrigueiD· 2 shared Sophie LerouxiD· 2 shared Stéphane FabreiD· 2 shared Abdelhak Boukadiri· 1 shared Adeline Goubil· 1 shared Alain PintoniD· 1 shared

Activity by Year

2015-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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2 shared papersGenomics

Gwenola Tosser‐KloppORCID

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4 papers

Recent·Most cited

Analysis Of Polycerate Mutants Reveals The Evolutionary Co-Option Of HOXD1 To Determine The Number And Topology Of Horns In Bovidae

Aurélie Allais‐Bonnet, Aurélie Hintermann, Marie-Christine Deloche, Raphaël Cornette, Philippe Bardou, Marina Naval-Sánchez, Alain Pinton, Ashleigh F. Haruda, Cécile Grohs, József Zákány, Daniele Bigi, Ivica Međugorac, Olivier Putelat, Ockert Greyvenstein, Tracy Hadfield, , Aurélien Capitan

The paper identifies POLYCERATE alleles in sheep and goats linked to defective HOXD1 function, showing haploinsufficiency causes horn bud splitting and highlights HOXD1's role in headgear patterning in Bovidae.

Molecular Biology and Evolution · Jan 29, 2021Peer-reviewedGenomics

RH mapping by sequencing: chromosome-scale assembly of the duck genome

Man Rao, Alain Vignal A, Mireille Morisson, Valérie Fillon, Sophie Leroux, Émeline Lhuillier, Diane Esquerré, Olivier Bouchez, Ning Li, Thomas Faraut

The paper describes a method to order and orient sequence scaffolds into chromosome-scale assemblies using RH mapping and sequencing in ducks.

bioRxiv · Nov 20, 2019 · PreprintGenomics

Transcriptome and chromatin structure annotation of liver, CD4+ and CD8+ T cells from four livestock species.

Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andréa Rau, Kévin Muret, Diane Esquerré, Matthias Zytnicki, Thomas Derrien, Philippe Bardou, Fany Blanc, Cédric Cabau, Elisa Crisci, Sophie Dhorne‐Pollet, Françoise Drouet, , Elisabetta Giuffra

The paper annotates transcriptomes and chromatin structures in liver and T cells from four livestock species using RNA-seq, ATAC-seq, and Hi-C, revealing conserved regulatory elements and genome organization patterns.

bioRxiv · May 16, 2019 · PreprintGenomics

Genome-wide characterization of RNA editing in chicken: lack of evidence for non-A-to-I events

Laure Frésard, Sophie Leroux, Pierre-François Roux, C Klopp, Stéphane Fabre, Diane Esquerré, Patrice Dehais, Anis Djari, David Gourichon, Sandrine Lagarrigue, Frédérique Pitel

The paper characterizes RNA editing in chicken, finding limited non-A-to-I events and highlighting evolutionary conservation of A-to-I editing.

PLOS ONE · May 29, 2015Peer-reviewedGenomics