Author

Duygu Koldere

VIB-KU Leuven Center for Brain & Disease Research

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

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Research Focus:cell type annotation· 2 Organism:Drosophila· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:scATAC-seq· 1

Frequent Co-Authors

Carmen Bravo González‐BlasiD· 2 shared Gert J. HulselmansiD· 2 shared Kristofer DavieiD· 2 shared Maxime De WaegeneeriD· 2 shared Samira MakhzamiiD· 2 shared Sara AibariD· 2 shared Stein AertsiD· 2 shared Suresh Kumar PoovathingaliD· 2 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Carmen Bravo González‐BlasORCID

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2 papers

Recent·Most cited

Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics

Carmen Bravo González‐Blas, Xiao‐Jiang Quan, Ramon Duran‐Romaña, Ibrahim Ihsan Taskiran, Duygu Koldere, Kristofer Davie, Valerie Christiaens, Samira Makhzami, Gert J. Hulselmans, Maxime De Waegeneer, David Mauduit, Suresh Kumar Poovathingal, Sara Aibar, Stein Aerts

The paper spatially integrates single-cell transcriptomics and epigenomics data to identify enhancers and gene regulatory relationships in Drosophila eye-antennal disc.

Molecular Systems Biology · May 1, 2020Peer-reviewedGenomics

A single-cell catalogue of regulatory states in the ageing Drosophila brain

Kristofer Davie, Jasper Janssens, Duygu Koldere, Maxime De Waegeneer, Ulrike Pech, Łukasz Kreft, Sara Aibar, Samira Makhzami, Valerie Christiaens, Carmen Bravo González‐Blas, Suresh Kumar Poovathingal, Gert J. Hulselmans, Katina I. Spanier, Thomas Moerman, Bram Vanspauwen, , Stein Aerts

This study creates a single-cell transcriptome catalogue of the Drosophila brain across its lifespan, revealing regulatory erosion and identifying novel neuronal states linked to ageing.

Cell · Jun 18, 2018Peer-reviewedGenomics