Author

Emily J. Collins

Rensselaer Polytechnic Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:experimental assay· 1

Frequent Co-Authors

Jennifer M. HurleyiD· 3 shared Meaghan S. JankowskiiD· 2 shared Annie M. CurtisiD· 1 shared April SaganiD· 1 shared Ava A. Herzog· 1 shared Carmalena V. CordiiD· 1 shared Catherine Mann· 1 shared George A. Timmons· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersMolecular Biology

Jennifer M. HurleyORCID

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Author profile →

3 papers

Recent·Most cited

Circadian disruption induces sex-specific Alzheimer's pathophysiology and immune cell reprogramming

Carmalena V. Cordi, Naomi G. Falkenberg, Gretchen T. Clark, Noah G. Allen, Joshua Chuah, Russell Ulbrich, Ava A. Herzog, Meghana Lanka, Emily J. Collins, Marvin Bentley, Jonathan S. Dordick, Meaghan S. Jankowski, Jennifer M. Hurley

This study shows circadian disruption causes sex-specific changes in Alzheimer's pathology and immune cell behavior in mice.

bioRxiv · May 5, 2026 · PreprintMolecular Biology

Post-Transcriptional Circadian Regulation in Macrophages Organizes Temporally Distinct Immunometabolic States

Emily J. Collins, Mariana P. Cervantes‐Silva, George A. Timmons, James R. O’Siorain, Annie M. Curtis, Jennifer Hurley

The paper shows that circadian regulation in macrophages involves extensive post-transcriptional control of the proteome, influencing metabolic states and immune functions.

Genome Research · Feb 1, 2021Peer-reviewedMolecular Biology

ECHO: an Application for Detection and Analysis of Oscillators Identifies Metabolic Regulation on Genome-Wide Circadian Output

Hannah De los Santos, Emily J. Collins, Catherine Mann, April Sagan, Meaghan S. Jankowski, Kristin P. Bennett, Jennifer Hurley

ECHO detects and analyzes oscillators in time-course genome-scale data, revealing metabolic regulation through circadian rhythms with changing amplitudes.

Bioinformatics · Aug 2, 2019Peer-reviewedBioinformatics