Author

Emmanuel Gonzalez

McGill University and Génome Québec Innovation CentrePrimary ORCID profile (0000-0003-3672-1398 · 2 papers)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Emmanuel GonzaleziD2 papers · McGill Genome Centre

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

André MaretteiD· 1 shared Arianna GiurleoiD· 1 shared B. CaroniD· 1 shared Bastien CastagneriD· 1 shared Corinne F. MauriceiD· 1 shared David Anderson de Lima MoraisiD· 1 shared David BujoldiD· 1 shared Édouard Henrion· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMicrobiology

André MaretteORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Discovery of a hydrolysis operon in Lachnospiraceae provides a genetic basis to understanding castalagin metabolism by the human microbiome in a clinical study.

Arianna Giurleo, Reilly Pidgeon, Emmanuel Gonzalez, Emma Thauvin, Lharbi Dridi, Corinne F. Maurice, André Marette, Bastien Castagner

The paper identifies a hydrolysis operon in Lachnospiraceae that enables castalagin metabolism to urolithins and flavogallonic acid in the human gut microbiome using multi-omics analysis of fecal samples from a clinical trial.

bioRxiv · Oct 6, 2026 · PreprintMicrobiology

GenPipes: an open-source framework for distributed and scalable genomic analyses

Mathieu Bourgey, Rola Dali, Robert J. M. Eveleigh, Kuang Chung Chen, Louis Létourneau, Joël Fillon, Marc Michaud, Maxime Caron, Johanna Sandoval, François Lefebvre, Gary Leveque, Eloi Mercier, David Bujold, Pascale Marquis, Patrick Tran Van, , Guillaume Bourque

GenPipes provides a scalable framework for genomic analyses, offering pre-built pipelines and flexibility for custom workflows.

GigaScience · Jun 1, 2019Peer-reviewedBioinformatics