Author

I. Xenarios

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Pharmacology & Toxicology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:plant (other)· 1

Frequent Co-Authors

A. Auger· 1 shared A. Bridge· 1 shared A. Harari· 1 shared A. Hirsekorn· 1 shared A. Reymond· 1 shared B. J. Stevenson· 1 shared C. Chong· 1 shared C. Fankhauser· 1 shared

Activity by Year

2017-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperCancer Biology

A. Auger

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Integrated Proteogenomic Deep Sequencing and Analytics Accurately Identify Non-Canonical Peptides in Tumor Immunopeptidomes

C. Chong, M. Muller, H. Pak, D. Harnett, F. Huber, D. Grun, M. Leleu, A. Auger, M. Arnaud, B. J. Stevenson, J. Michaux, I. Bilic, A. Hirsekorn, L. Calviello, L. Simo-Riudalbas, , M. Bassani-Sternberg

The paper develops an MS-based proteogenomic approach to identify non-canonical HLA peptides in tumors, finding hundreds of shared and tumor-specific peptides, including an immunogenic one from ABCB5.

bioRxiv · Sep 6, 2019Cancer Biology

Navigating in vitro bioactivity data: investigating available resources using model compounds

S. Ilmjarv, F. Augsburger, J. T. Bolleman, R. Liechti, A. Bridge, J. Sandstrom, V. Jaquet, I. Xenarios, K.-H. Krause

This study evaluates public resources for in vitro compound data, identifying inconsistencies and proposing ontology-based improvements for data retrieval and annotation.

bioRxiv · Jan 17, 2018Pharmacology & Toxicology

Low Rate of Somatic Mutations in a Long-Lived Oak Tree

N. Sarkar, E. Schmid-Siegert, C. Iseli, S. Calderon, C. Gouhier-Darimont, J. Chrast, P. Cattaneo, F. Schutz, L. Farinelli, M. Pagni, M. Schneider, J. Voumard, M. Jaboyedoff, C. Fankhauser, C. S. Hardtke, , P. Reymond

The paper sequenced two branches of a 234-year-old oak tree and found few somatic mutations, suggesting shoot meristems are mutation-resistant.

bioRxiv · Jul 24, 2017Plant Biology