Author

Ilija Ilievski

University of Oxford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Hashem KoohyiD· 2 shared Agne AntanaviciuteiD· 1 shared Ali El Moselhy· 1 shared Benjamin McMasteriD· 1 shared Charlotte Mary DeaneiD· 1 shared Christopher J. ThorpeiD· 1 shared Graham Ogg· 1 shared Jamie RossjohniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

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2 shared papersImmunology

Hashem KoohyORCID

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2 papers

Recent·Most cited

Beyond Better Models: Barriers and a Path Forward in Generalisable TCR Antigen Specificity Prediction

Ilija Ilievski, Agne Antanaviciute, Graham Ogg, Hashem Koohy

This paper identifies barriers to generalisable TCR:pMHC prediction and proposes solutions through data analysis, evaluation setup, and metric alignment.

bioRxiv · Oct 22, 2026 · PreprintImmunology

Characterising AlphaFold 3s ability to predict T cell antigen specificity

Benjamin McMaster, Ali El Moselhy, Ilija Ilievski, Christopher J. Thorpe, Nicole L. La Gupta, Jamie Rossjohn, Charlotte Mary Deane, Hashem Koohy

This study evaluates AlphaFold 3's ability to predict T cell antigen specificity using structural models and finds that binding scores correlate with TCR positioning over pMHC, not chemical interactions.

bioRxiv · Jul 15, 2026 · PreprintSystems Biology