Author

Ilya Chorny

Branston (United Kingdom)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genomics· 2 Biochemistry· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Assay:proteomics· 2 Research Focus:variant calling· 2 Research Focus:differential expression· 1 Research Focus:protein folding & dynamics· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Andi FloryiD· 2 shared Dana W.Y. TsuiiD· 2 shared Daniel S. GrosuiD· 2 shared Douglas H. PikeiD· 2 shared Jason ChibukiD· 2 shared John A. TynaniD· 2 shared John Vieceli· 2 shared Kristina M. Kruglyak· 2 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Andi FloryORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Protein Barcoding and Next-Generation Protein Sequencing for Multiplexed Protein Selection, Analysis, and Tracking

Mathivanan Chinnaraj, Haidong Huang, Sebastian Hutchinson, Michael Meyer, Douglas H. Pike, Marco Ribezzi‐Crivellari, Sharmin Sultana, Ghada H. Mansour, Derrek Ocampo, Fengling Ding, Meredith L. Carpenter, Ilya Chorny, John Vieceli

This study develops a protein barcoding workflow with single-molecule Next-Generation Protein Sequencing to enable multiplexed protein analysis and tracking.

bioRxiv · Dec 31, 2024 · PreprintBiochemistry

Detecting Amino Acid Variants Using Next-Generation Protein Sequencing (NGPS)

Mathivanan Chinnaraj, Jianan Lin, Kristin M. Blacklock, E. Hermes, Michael Meyer, Douglas H. Pike, John Vieceli, Ilya Chorny

The paper introduces ProteoVue, a bioinformatics pipeline for detecting and quantifying single amino acid variants using NGPS data, showing accurate variant calling across diverse substitutions.

bioRxiv · Dec 17, 2024 · PreprintBioinformatics

Next-generation sequencing-based liquid biopsy can be used for detection of residual disease and cancer recurrence monitoring in dogs

Angela L. McCleary‐Wheeler, Patrick C. Fiaux, Carlos A. Ruiz-Pérez, Lisa M. McLennan, John A. Tynan, Susan Cho Hicks, Jill M. Rafalko, Daniel S. Grosu, Jason Chibuk, Allison L. O’Kell, Todd A. Cohen, Brian K. Flesner, Ilya Chorny, Dana W.Y. Tsui, Kristina M. Kruglyak, Andi Flory

This study evaluates a next-generation sequencing-based liquid biopsy test for detecting residual disease and monitoring cancer recurrence in dogs, finding it can identify recurrence earlier than clinical assessment.

American Journal of Veterinary Research · Dec 27, 2023Peer-reviewedGenomics

Blood-based liquid biopsy for comprehensive cancer genomic profiling using next-generation sequencing: an emerging paradigm for noninvasive cancer detection and management in dogs

Kristina M. Kruglyak, Jason Chibuk, Lisa M. McLennan, Prachi Nakashe, Gilberto E. Hernandez, Rita Motalli-Pepio, Donna M. Fath, John A. Tynan, Lauren E. Holtvoigt, Ilya Chorny, Daniel S. Grosu, Dana W.Y. Tsui, Andi Flory

This study shows that blood-based liquid biopsy using next-generation sequencing can detect genomic alterations in dogs with cancer, matching tumor tissue findings and identifying alterations from spatially separated tumor sites.

Frontiers in Veterinary Science · Jul 8, 2021Peer-reviewedGenomics