Author

J. A. Harris

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Biophysics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Approach:mechanistic / dynamical model· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

A. B. Gondin· 1 shared A. Bonn· 1 shared A. Chatzinotas· 1 shared A. Manglik· 1 shared A. S. Singer· 1 shared B. Faust· 1 shared B. Mueller· 1 shared B. Tietjen· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBiochemistry

A. B. Gondin

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GPU-Accelerated All-atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber

J. A. Harris, R. Liu, V. Martins de Oliveira, E. Vazquez Montelongo, J. A. Henderson, J. Shen

This paper introduces a GPU-accelerated all-atom continuous constant pH MD method with PME electrostatics in Amber22, validated on six proteins with improved pKa accuracy and biological relevance.

bioRxiv · Jun 4, 2022Biophysics

Selective G protein signaling driven by Substance P-Neurokinin Receptor structural dynamics

J. A. Harris, B. Faust, A. B. Gondin, M. A. Damgen, C.-M. Suomivuori, N. A. Veldhuis, Y. Cheng, R. O. Dror, D. M. Thal, A. Manglik

This study investigates how different agonists of the NK1R receptor influence G-protein signaling through structural dynamics and extracellular loop interactions.

bioRxiv · May 16, 2021Biochemistry

Resilience trinity: safeguarding ecosystem services across three different time horizons and decision contexts

H. Weise, H. Auge, C. Baessler, I. Baerlund, E. M. Bennett, U. Berger, F. Bohn, A. Bonn, D. Borchardt, F. Brand, A. Chatzinotas, R. Corstanje, F. De Laender, P. Dietrich, S. Dunker, , V. Grimm

The paper introduces a conceptual framework called resilience trinity to manage ecosystem resilience across three decision contexts and time horizons.

bioRxiv · Feb 14, 2019Ecology