Author

Jake Kovalic

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Genetics· 1

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Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Assay:proteomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Alexis WeinrebiD· 1 shared Arman AfrasiyabiiD· 1 shared Chen LiuiD· 1 shared David M. MilleriD· 1 shared Egbert CastroiD· 1 shared Erdem VaroliD· 1 shared Marc HammarlundiD· 1 shared Smita KrishnaswamyiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperGenetics

Alexis WeinrebORCID

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1 paper

Recent·Most cited

CellSpliceNet: Interpretable Multimodal Modeling ofAlternative Splicing Across Neurons in C. elegans

Arman Afrasiyabi, Jake Kovalic, Chen Liu, Egbert Castro, Alexis Weinreb, Erdem Varol, David M. Miller, Marc Hammarlund, Smita Krishnaswamy

CellSpliceNet predicts alternative splicing outcomes in C. elegans neurons by integrating multiple data modalities and achieving high predictive accuracy.

bioRxiv · Jun 22, 2025 · PreprintGenetics