Author

Jasmine Shum

Brown University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Erica LarschaniD· 2 shared Mukulika RayiD· 2 shared Pranav Mahableshwarkar· 2 shared Alexander E. ConicellaiD· 1 shared Annie HuangiD· 1 shared Ashley Mae ConardiD· 1 shared Isabelle Pilo· 1 shared Julia Zaborowsky· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Erica LarschanORCID

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2 papers

Recent·Most cited

BindCompare: A Novel Integrated protein-nucleic Acid Binding Analysis Platform

Pranav Mahableshwarkar, Jasmine Shum, Mukulika Ray, Erica Larschan

BindCompare identifies combinatorial TF-RBP binding interactions by comparing their nucleic acid targets across organisms, generating hypotheses for gene regulatory networks.

Bioinformatics · Nov 1, 2024Peer-reviewedGenomics

A dual DNA/RNA-binding factor regulates co-transcriptional splicing through target RNA interaction and modulates splicing factor dynamics

Mukulika Ray, Julia Zaborowsky, Pranav Mahableshwarkar, Smriti Vaidyanathan, Jasmine Shum, Annie Huang, Renjith Viswanathan, Isabelle Pilo, Victoria Chen, Kaitlyn Cortez, Ashley Mae Conard, Szu‐Huan Wang, Victoria Johnson, Noah Wake, Alexander E. Conicella, , Erica Larschan

The paper shows CLAMP, a DNA-binding factor, regulates sex-specific splicing by interacting with RNA and modulating RBP dynamics.

bioRxiv · Jan 11, 2024 · PreprintGenomics