Author

Jean-Marc Aury

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Organism:Arabidopsis· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Organism:plant (other)· 1 Approach:statistical model· 1

Frequent Co-Authors

Patrick WinckeriD· 2 shared Anne FriedrichiD· 1 shared Arnaud CoulouxiD· 1 shared Arnaud Lemainque· 1 shared Benjamin IstaceiD· 1 shared Carole Dossat· 1 shared Claudia Caradec· 1 shared Corinne CruaudiD· 1 shared

Activity by Year

2016-2017 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersEvolutionary Biology

Patrick WinckerORCID

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Author profile →

3 papers

Recent·Most cited

Peculiar hybrid genomes of devastating plant pests promote plasticity in the absence of sex and meiosis

Romain Blanc-Mathieu, Laetitia Perfus-Babeoch, Jean-Marc Aury, Martine Da Rocha, Jerome Gouzy, Erika Sallet, Cristina Martin-Jimenez, Philippe Castagnone-Sereno, Jean-Francois Flot, Djampa Kozlowski, Julie Cazareth, Arnaud Couloux, Corinne Da Silva, Julie Guy, Corinne Rancurel, , Etienne Danchin

This study compares genomes of ameiotic root-knot nematodes to meiotic relatives, finding TE-rich composite genomes from hybridization events that may enhance parasitic success without sex.

PLOS Genetics · Jun 8, 2017Peer-reviewedEvolutionary Biology

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

Benjamin Istace, Anne Friedrich, Léo d'Agata, Sébastien Faye, Emilie Payen, Odette Beluche, Claudia Caradec, Sabrina Davidas, Corinne Cruaud, Gianni Liti, Arnaud Lemainque, Stefan Engelen, Patrick Wincker, Joseph Schacherer, Jean-Marc Aury

The paper evaluates nanopore-only genome assemblies of yeast isolates using MinION, showing improved contiguity and structural variant detection compared to Illumina-only assemblies.

bioRxiv · Jul 28, 2016Bioinformatics

MaGuS: a tool for map-guided scaffolding and quality assessment of genome assemblies

Mohammed-Amin Madoui, Carole Dossat, Leo d'Agata, Edwin van der Vossen, Jan van Oeveren, Jean-Marc Aury

MaGuS improves genome assembly continuity and quality by linking assemblies to a genome map and detecting errors, using Arabidopsis as a test case.

BMC Bioinformatics · Mar 3, 2016Peer-reviewedGenomics