Author

Jie Yan

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:fungi (other)· 1 Research Focus:host-pathogen & immune response· 1 Research Focus:perturbation response prediction· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Huan Ma· 1 shared Jiaxin HuiD· 1 shared Jinhu Guo· 1 shared Limeng Tian· 1 shared Ling Yang· 1 shared Luyao Li· 1 shared Menghan Gao· 1 shared Nian Liu· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMicrobiology

Huan Ma

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2 papers

Recent·Most cited

Cause-excluded Effect Evaluation: a framework for the faithful assessment of genetic perturbation target identification

Jiaxin Hu, Xiaoning Qi, Limeng Tian, Jie Yan, Nian Liu, Xin Li

The paper introduces CEE, a framework to assess genetic perturbation target identification by eliminating evaluation artefacts, and finds simple methods outperform complex models.

bioRxiv · Oct 11, 2026 · PreprintBioinformatics

The synchronization and adaptation of Neurospora crassa circadian and conidiation rhythms to short light-dark cycles

Huan Ma, Luyao Li, Jie Yan, Yin Zhang, Weirui Shi, Yunzhen Li, Menghan Gao, Siyu Pan, Ling Yang, Jinhu Guo

This study investigates how Neurospora crassa adapts its circadian and conidiation rhythms to short light-dark cycles, showing that core clock protein FREQUENCY entrains to cycles longer than 3:3 but free runs otherwise.

bioRxiv · Jun 20, 2018 · PreprintMicrobiology