Author

Jielun Cai

BGI Group (China)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:transformer / foundation model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Huahui ReniD· 2 shared Huanzi ZhongiD· 2 shared Shida ZhuiD· 2 shared Chao FangiD· 1 shared Daxi WangiD· 1 shared Fang CheniD· 1 shared Fangming YangiD· 1 shared Guifang YangiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Huahui RenORCID

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Author profile →

2 papers

Recent·Most cited

Genos-m: a foundation model for human-associated microbial genomes

Chao Fang, Fangming Yang, Hao Hou, Huahui Ren, Huanzi Zhong, Huinan Xu, Jiahao Zhang, Jianxin Su, Jielun Cai, Jingnan Yuan, Leo Jingyu Lee, Junhua Li, Kui Wu, Lihui Wang, Liwen Xiong, , Zhun Shi

Genos-m is a foundation model for human-associated microbial genomes that outperforms existing models in gene-fitness prediction and community structure analysis.

bioRxiv · May 24, 2026 · PreprintBioinformatics

Multiple approaches for massively parallel sequencing of HCoV-19 (SARS-CoV-2) genomes directly from clinical samples

Minfeng Xiao, Xiaoqing Liu, Jingkai Ji, Min Li, Jiandong Li, Lin Yang, Wanying Sun, Peidi Ren, Guifang Yang, Jincun Zhao, Tianzhu Liang, Huahui Ren, Tian Chen, Huanzi Zhong, Wenchen Song, , Junhua Li

This paper compares amplicon, hybrid capture, and metatranscriptomic sequencing methods for directly sequencing SARS-CoV-2 genomes from clinical samples, finding differences in bias, sensitivity, and accuracy.

Genome Medicine · Jun 30, 2020Peer-reviewedGenomics