Author

Joseph D. Yesselman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 3 Research Focus:protein structure prediction· 3 Assay:structural biology· 3 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Daniel Herschlag· 2 shared Rhiju DasiD· 2 shared Alexandra N. Ooms· 1 shared Daniel Eiler· 1 shared David A. Costantino· 1 shared Erik D. Carlson· 1 shared Jeffrey S. Kieft· 1 shared Michael C. JewettiD· 1 shared

Activity by Year

2015-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBiophysics

Daniel Herschlag

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Author profile →

3 papers

Recent·Most cited

RNA tertiary structure energetics predicted by an ensemble model of the RNA double helix

Joseph D. Yesselman, Sarah K. Denny, Namita Bisaria, Daniel Herschlag, William J. Greenleaf, Rhiju Das

The paper predicts RNA tertiary structure energetics using an updated helix ensemble model, showing accurate thermodynamic predictions for tertiary assemblies.

bioRxiv · Jun 6, 2018 · PreprintBiophysics

Computational Design of Asymmetric Three-dimensional RNA Structures and Machines.

Joseph D. Yesselman, Daniel Eiler, Erik D. Carlson, Alexandra N. Ooms, Wipapat Kladwang, Xuesong Shi, David A. Costantino, Daniel Herschlag, Michael C. Jewett, Jeffrey S. Kieft, Rhiju Das

The paper introduces RNAMake, a tool for designing asymmetric RNA structures, validated through experimental methods and demonstrating successful creation of complex 3D RNA folds and synthetic ribosomes.

bioRxiv · Nov 21, 2017 · PreprintBioengineering

Modeling Small Non-canonical RNA Motifs with the Rosetta FARFAR Server

Joseph D. Yesselman, Rhiju Das

The paper describes protocols to model small non-canonical RNA motifs using the Rosetta FARFAR server for structural prediction and refinement.

bioRxiv · Nov 11, 2015 · PreprintBiophysics