Author

Judith Lohse

University Hospital Carl Gustav Carus

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-exome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Carolin WalteriD· 2 shared Franziska AueriD· 2 shared Julia HaueriD· 2 shared Arndt BorkhardtiD· 1 shared Arne JahniD· 1 shared Claudia Zinke· 1 shared Evelin SchröckiD· 1 shared Jonas Langanke· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Carolin WalterORCID

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2 papers

Recent·Most cited

T-Rex: Standardized Analysis of Germline Variants in Whole-Exome Sequencing Trios

Sara-Luisa Reh, Carolin Walter, Judith Lohse, Tabita Ghete, Markus Metzler, Julia Hauer, Franziska Auer

T-Rex provides a standardized, no-programming-required tool for analyzing whole-exome sequencing trio data, achieving high precision and sensitivity in variant calling and filtering.

Scientific Reports · Aug 31, 2026Peer-reviewedBioinformatics

Clinical criteria for genetic testing in pediatric oncology show a low specificity and miss every 4th child carrying a cancer predisposition

Ulrike Anne Friedrich, Marc Bienias, Claudia Zinke, Maria Prazenicova, Judith Lohse, Arne Jahn, Maria Menzel, Jonas Langanke, Carolin Walter, Rabea Wagener, Triantafyllia Brozou, Julian Varghese, Martin Dugas, Evelin Schröck, Meinolf Suttorp, , Franziska Auer

The paper evaluates clinical checklists for genetic testing in pediatric oncology, finding low specificity and missing 25% of children with cancer predisposition variants.

medRxiv · Oct 22, 2022 · PreprintGenetic & Genomic Medicine