Nearest Neighbor Parameters for Estimating the Folding Stability of RNA Including Pseudouridine
Thandolwethu S. Shabangu, Elzbieta Kierzek, Sebastian J. Arteaga, Gregory S. Orf, Julia Stone, Olivia M. Hiltke, Megan Miaro, Elizabeth A. Jolley, Marta Soszynska-Jozwiak, Marta Szabat, Sharon Aviran, Philip C. Bevilacqua, Brent M. Znosko, Ryszard Kierzek, David H. Mathews
This paper presents nearest neighbor parameters for estimating RNA folding stability with pseudouridine, derived from optical melting experiments, and demonstrates their application in modeling RNA secondary structures.
bioRxiv · May 17, 2026 · PreprintBiochemistry