Author

Julian O. Kimura

Harvard University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:fluorescence / live-cell microscopy· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Lorenzo RicciiD· 2 shared Mansi SrivastavaiD· 2 shared Bingying ZhaoiD· 1 shared Brandon WeissbourdiD· 1 shared Chuan LiiD· 1 shared Diana Marcela BolanosiD· 1 shared Jerome C. MertziD· 1 shared Jian ZhaoiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersDevelopmental Biology

Lorenzo RicciORCID

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3 papers

Recent·Most cited

Superresolution imaging of live samples by centroid reassignment microscopy

Chuan Li, Quan Le, Julian O. Kimura, Bingying Zhao, Yunzhe Li, Jian Zhao, Thomas G. Bifano, Brandon Weissbourd, John T. Ngo, Jerome C. Mertz

This paper introduces a superresolution microscopy technique called centroid reassignment microscopy (CRM) that enables fast, robust, and protocol-compatible imaging of live samples.

bioRxiv · Aug 3, 2025 · PreprintBioengineering

Acoel single-cell atlas reveals expression dynamics and heterogeneity of a pluripotent stem cell population

Ryan E. Hulett, Julian O. Kimura, Diana Marcela Bolanos, Yi‐Jyun Luo, Lorenzo Ricci, Mansi Srivastava

The paper characterizes stem cell dynamics and heterogeneity in the acoel Hofstenia miamia using single-cell transcriptomics, revealing lineage-primed neoblast subpopulations and their response to regeneration.

bioRxiv · Feb 10, 2022 · PreprintDevelopmental Biology

Embryonic development in the acoel Hofstenia miamia

Julian O. Kimura, Lorenzo Ricci, Mansi Srivastava

The paper characterizes embryonic development in Hofstenia miamia with transcriptome data, identifying developmental landmarks and a novel cell internalization event.

Development · Jul 1, 2021Peer-reviewedDevelopmental Biology