Author

K. I. Rajapakshe

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 4 Organism:human· 4 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Research Focus:cell type annotation· 2 Organism:mouse· 2 Assay:spatial transcriptomics· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

P. A. Guerrero· 4 shared A. Maitra· 3 shared C. M. Schmidt· 3 shared M. W. Hurd· 3 shared M. Yip-Schneider· 3 shared Y. Makino· 3 shared F. I. Thege· 2 shared J. Min· 2 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersCancer Biology

P. A. Guerrero

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4 papers

Recent·Most cited

Cancer BiologybioRxivPreprintAug 14, 2023

Integrated spatial transcriptomics and lipidomics of precursor lesions of pancreatic cancer identifies enrichment of long chain sulfatide biosynthesis as an early metabolic alteration

M. Sans, Y. Chen, F. I. Thege…·J. F. Fahrmann

DOI 10.1101/2023.08.14.553002

𝕏 PostBluesky

Cancer BiologyCancer DiscoveryPeer-reviewedJun 7, 2023

Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 as a Driver of Gastric Differentiation and Indolent Biological Potential

M. Sans, Y. Makino, J. Min…·A. Maitra

This study identifies NKX6-2 as a driver of gastric differentiation in IPMNs, linking its expression to indolent biological potential and progression.

DOI 10.1158/2159-8290.cd-22-1200

𝕏 PostBluesky

Cancer BiologybioRxivOct 27, 2022

Transcriptomic Profiling of Plasma Extracellular Vesicles Enables Reliable Annotation of the Cancer-specific Transcriptome and Molecular Subtype

V. Bahrambeigi, J. J. Lee, V. Branchi…·E. Ruppin

This study uses deep learning on plasma extracellular vesicle RNA to predict cancer subtypes, monitor treatment effects, and identify gene fusions and neoepitopes without tissue sampling.

DOI 10.1158/0008-5472.can-23-4070

humanbulk RNA-seq

𝕏 PostBluesky

Cancer BiologybioRxivPreprintOct 14, 2022

Integrated Molecular Characterization of Intraductal Papillary Mucinous Neoplasms: An NCI Cancer Moonshot Precancer Atlas Pilot Project

A. Semaan, V. Bernard, J. Wong…·P. A. Guerrero

This study integrates genomic and transcriptomic analysis of intraductal papillary mucinous neoplasms (IPMNs) to identify molecular features associated with progression to high-grade lesions and cancer.

DOI 10.1101/2022.10.14.512148

humanwhole-exome sequencing

𝕏 PostBluesky