Author

K. J. Granberg

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Urbanucci· 2 shared M. Nykter· 2 shared T. Visakorpi· 2 shared A. D. Lamb· 1 shared A. Erickson· 1 shared A. Kiviaho· 1 shared A. Lussana· 1 shared A. Shcherban· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

A. Urbanucci

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2 papers

Recent·Most cited

Single-cell ATAC and RNA sequencing reveal pre-existing and persistent subpopulations of cells associated with relapse of prostate cancer

S. Taavitsainen, N. Engedal, S. Cao, F. Handle, A. Erickson, S. Prekovic, D. Wetterskog, T. Tolonen, E. M. Vuorinen, A. Kiviaho, R. Nätkin, T. Häkkinen, W. Devlies, S. Henttinen, R. Kaarijärvi, , A. Urbanucci

The paper uses single-cell ATAC and RNA sequencing to identify pre-existing and treatment-persistent stem-like cell subpopulations in prostate cancer models that predict treatment response.

bioRxiv · Feb 9, 2021Cancer Biology

Chromatin accessibility analysis uncovers regulatory element landscape in prostate cancer progression

J. Uusi-Mäkelä, E. Afyounian, F. Tabaro, T. Häkkinen, A. Lussana, A. Shcherban, M. Annala, R. Nurminen, K. Kivinummi, T. L. J. Tammela, A. Urbanucci, L. Latonen, J. Kesseli, K. J. Granberg, T. Visakorpi, M. Nykter

The paper analyzes chromatin accessibility in prostate cancer stages to identify regulatory elements and their role in gene expression changes during disease progression.

bioRxiv · Sep 8, 2020 · PreprintCancer Biology