Author

K. Kokkinias

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:genetic perturbation / CRISPR· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Sabag-Daigle· 2 shared B. M. M. Ahmer· 2 shared I. Leleiwi· 2 shared K. C. Wrighton· 2 shared M. A. Borton· 2 shared M. Shaffer· 2 shared R. A. Daly· 2 shared J. Rodriguez-Ramos· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMicrobiology

A. Sabag-Daigle

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Time resolved multi-omics reveals diverse metabolic strategies of Salmonella during diet-induced inflammation

K. Kokkinias, A. Sabag-Daigle, Y. Kim, I. Leleiwi, M. Shaffer, R. Kevorkian, R. A. Daly, V. H. Wysocki, M. A. Borton, B. M. M. Ahmer, K. C. Wrighton

This study uses multi-omics to analyze Salmonella's metabolic strategies in mice on different diets over time, identifying phase-specific gene expression linked to infection stages and therapeutic targets.

bioRxiv · Feb 3, 2024 · PreprintMicrobiology

Exposing New Taxonomic Variation with Inflammation-A Murine Model-Specific Genome Database for Gut Microbiome Researchers

I. Leleiwi, J. Rodriguez-Ramos, M. Shaffer, A. Sabag-Daigle, K. Kokkinias, R. M. Flynn, R. A. Daly, L. F. Kop, L. M. Solden, B. M. M. Ahmer, M. A. Borton, K. C. Wrighton

The paper presents a genomic catalog of the CBA/J murine gut microbiome, revealing taxonomic and functional changes during Salmonella-induced inflammation.

bioRxiv · Oct 24, 2022 · PreprintMicrobiology