Author

K. Panke-Buisse

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:long-read sequencing· 2 Assay:metagenomics· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

I. Liachko· 2 shared S. T. Sullivan· 2 shared A. Korobeynikov· 1 shared A. M. Phillippy· 1 shared A. Zorea· 1 shared B. J. Haley· 1 shared C. Heiner· 1 shared C. P. Van Tassell· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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2 shared papersMicrobiology

I. Liachko

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Generation of lineage-resolved complete metagenome-assembled genomes by precision phasing

D. M. Bickhart, M. Kolmogorov, E. Tseng, D. Portik, A. Korobeynikov, I. Tolstoganov, G. Uritskiy, I. Liachko, S. T. Sullivan, S. B. Shin, A. Zorea, V. P. Andreu, K. Panke-Buisse, M. H. Medema, I. Mizrahi, , T. P. Smith

The paper generates lineage-resolved complete MAGs using HiFi reads from sheep fecal samples, achieving high-resolution deconvolution of microbial communities.

bioRxiv · May 4, 2021 · PreprintMicrobiology

The biogeography of Streptomyces in New Zealand enabled by high-throughput sequencing of genus-specific rpoB amplicons

S. A. Higgins, K. Panke-Buisse, D. H. Buckley

This study examines Streptomyces biogeography in New Zealand soils using rpoB amplicon sequencing, finding that soil pH and plant community richness influence community structure.

bioRxiv · Sep 22, 2020Microbiology

Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

D. Bickhart, M. Watson, S. Koren, K. Panke-Buisse, L. M. Cersosimo, M. O. Press, C. P. Van Tassell, J. A. S. Van Kessel, B. J. Haley, S. W. Kim, C. Heiner, G. Suen, K. Bakshy, I. Liachko, S. T. Sullivan, , T. P. L. Smith

This study uses long-read sequencing and proximity ligation to improve the characterization of a complex cattle rumen microbial community, identifying novel viral-host associations and more antimicrobial resistance genes.

bioRxiv · Dec 9, 2018Microbiology