Author

I. Mizrahi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6 Cell Biology· 2 Ecology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Assay:metagenomics· 5 Research Focus:cell type annotation· 3 Research Focus:ecology & biodiversity· 3 Approach:statistical model· 3 Research Focus:chromatin & epigenetic regulation· 2 Organism:human· 2 Assay:proteomics· 2

Frequent Co-Authors

A. Zorea· 3 shared O. Furman· 2 shared O. Medalia· 2 shared S. Morais· 2 shared T. Wein· 2 shared A. Altshuler· 1 shared A. Amitai-Lange· 1 shared A. Brown Kav· 1 shared

Activity by Year

2018-2022 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 7 mutual co-author links

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3 shared papersEcology

A. Zorea

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

A link between genotype and cellular architecture in microbiome members as revealed by cryo-EM

B. H. Wimmer, S. Morais, R. Zalk, I. Mizrahi, O. Medalia

The paper uses cryo-EM to analyze microbial cellular architecture and finds that structural similarity correlates with taxonomic distance within families but not above.

bioRxiv · Sep 8, 2022Microbiology

Multilayer Networks of Plasmid Genetic Similarity Reveal Potential Pathways of Gene Transmission

J. T. Shapiro, A. Zorea, A. Brown Kav, V. J. Ontiveros, I. Mizrahi, S. Pilosof

The paper constructs a multilayer network of plasmid genetic similarity in cow rumen data to identify gene transmission pathways and mechanisms across hosts.

bioRxiv · Sep 8, 2022Ecology

Asgard ESCRT-III and VPS4 reveal evolutionary conserved chromatin binding properties of the ESCRT machinery

D. Nachmias, N. Melnikov, A. Zorea, Y. De-picchoto, R. Zarivach, I. Mizrahi, N. Elia

The paper shows that Asgard and human ESCRT-III/VPS4 proteins bind chromatin and form nuclear foci, indicating conserved chromatin-binding properties across evolution.

bioRxiv · Nov 29, 2021Cell Biology

Biomechanical property of limbal niche maintains stemness through YAP

S. Bhattacharya, A. Mukherjee, S. Pisano, S. Dimri, E. Knaane, A. Altshuler, W. Nasser, S. Dey, L. Shi, I. Mizrahi, O. Jokel, A. Amitai-Lange, A. Kaganovsky, M. Mimouni, S. Socea, , R. Shalom-Feuerstein

This study shows that biomechanical properties of the limbal niche regulate YAP activity, which is essential for maintaining stemness and regeneration in corneal epithelial stem cells.

bioRxiv · May 25, 2021Cell Biology

Generation of lineage-resolved complete metagenome-assembled genomes by precision phasing

D. M. Bickhart, M. Kolmogorov, E. Tseng, D. Portik, A. Korobeynikov, I. Tolstoganov, G. Uritskiy, I. Liachko, S. T. Sullivan, S. B. Shin, A. Zorea, V. P. Andreu, K. Panke-Buisse, M. H. Medema, I. Mizrahi, , T. P. Smith

The paper generates lineage-resolved complete MAGs using HiFi reads from sheep fecal samples, achieving high-resolution deconvolution of microbial communities.

bioRxiv · May 4, 2021 · PreprintMicrobiology

Nanoscale resolution of microbial fiber degradation in action

M. Tatli, S. Morais, O. E. Tovar-Herrera, Y. Bomble, E. A. Bayer, O. Medalia, I. Mizrahi

This study reveals the in-situ organization of cellulosomes and their substrates during microbial fiber degradation, showing phenotypic heterogeneity and growth-phase dependent dynamics.

bioRxiv · Feb 16, 2021Microbiology

Protozoa populations are ecosystem engineers that shape prokaryotic community structure and function of the rumen microbial ecosystem

R. Solomon, T. Wein, B. Levy, S. Eshed, R. Dror, V. Reiss, T. Zehavi, O. Furman, I. Mizrahi, E. Jami

This study shows that protozoa in the rumen significantly influence prokaryotic community structure and function, including methane production and diversity.

bioRxiv · May 15, 2020Microbiology

Context-dependent dynamics lead to the assembly of functionally distinct pitcher-plant microbiomes

L. S. Bittleston, M. Gralka, G. E. Leventhal, I. Mizrahi, O. X. Cordero

The paper shows that early community states influence the diversity and function of pitcher-plant microbiomes in synthetic microcosms, with compositional differences correlating with functional differences.

bioRxiv · Aug 21, 2019Ecology

Segregational drift and the interplay between plasmid copy number and evolvability

J. Ilhan, A. Kupczok, C. Woehle, T. Wein, N. F. Huelter, P. Rosenstiel, G. Landan, I. Mizrahi, T. Dagan

This study shows that segregational drift in multicopy plasmids reduces their evolvability by increasing mutation loss and fixation time, despite higher mutational supply.

bioRxiv · Oct 21, 2018Microbiology

Modeling the temporal dynamics of the gut microbial community in adults and infants

L. Shenhav, O. Furman, L. Briscoe, M. Thompson, I. Mizrahi, E. Halperin

The paper introduces MTV-LMM, a model for predicting gut microbiome temporal dynamics, and shows it outperforms existing methods by revealing significant time-dependent microbial patterns in both infants and adults.

bioRxiv · Apr 5, 2018Microbiology