Author

L. K. Pino

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 3

Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Approach:deep learning· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:protein folding & dynamics· 2 Research Focus:benchmarking· 1 Research Focus:software / tool· 1 Organism:yeast· 1

Frequent Co-Authors

B. C. Searle· 2 shared M. J. MacCoss· 2 shared A. N. Hoofnagle· 1 shared B. A. Garcia· 1 shared B. Schilling· 1 shared H.-Y. Yang· 1 shared J. Baeza· 1 shared J. D. Egertson· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersBiochemistry

B. C. Searle

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3 papers

Recent·Most cited

Improved SILAC quantification with data independent acquisition to investigate bortezomib-induced protein degradation

L. K. Pino, J. Baeza, R. Lauman, B. Schilling, B. A. Garcia

This paper improves SILAC quantification using DIA to study bortezomib-induced protein degradation, finding enhanced accuracy and sensitivity in protein turnover models.

bioRxiv · Nov 23, 2020Biochemistry

Matrix-matched calibration curves for assessing analytical figures of merit in quantitative proteomics

L. K. Pino, B. C. Searle, H.-Y. Yang, A. N. Hoofnagle, W. S. Noble, M. J. MacCoss

The paper demonstrates how to assess quantitative peptide measurements in proteomics using matrix-matched calibration curves and shows that more detected peptides do not guarantee more quantitatively measurable peptides.

bioRxiv · Jul 30, 2019Biochemistry

Comprehensive peptide quantification for data independent acquisition mass spectrometry using chromatogram libraries

B. C. Searle, L. K. Pino, J. D. Egertson, Y. S. Ting, R. T. Lawrence, J. Villen, M. J. MacCoss

The paper introduces a workflow and software tool, EncyclopeDIA, to improve peptide quantification in DIA mass spectrometry by using chromatogram libraries calibrated to specific instruments.

bioRxiv · Mar 7, 2018Biochemistry