Author

L. M. Contreras

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Organism:E. coli· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Assay:imaging· 1

Frequent Co-Authors

A. C. Stankes· 1 shared A. Hillsley· 1 shared A. M. Rosales· 1 shared B. K. Keitz· 1 shared C. Herrfurth· 1 shared C. Leidy· 1 shared D. Chiu· 1 shared D. M. Riano-Pachon· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperBioengineering

A. C. Stankes

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Rewiring native post-transcriptional carbon regulators to build multi-layered genetic circuits and optimize engineered microbes for bioproduction

T. R. Simmons, G. Partipilo, A. C. Stankes, R. Srivastava, R. Buchser, D. Chiu, B. K. Keitz, L. M. Contreras

This paper rewires the Csr Network in E. coli to create tunable genetic circuits for post-transcriptional control, achieving three-fold increased mevalonate production.

bioRxiv · Oct 4, 2023 · PreprintBioengineering

A Strategy to Quantify Myofibroblast Activation on a Continuous Spectrum

A. Hillsley, M. Santoso, S. M. Engels, L. M. Contreras, A. M. Rosales

This paper introduces a method to quantify myofibroblast activation on a continuous spectrum using optical microscopy and machine learning, showing improved accuracy over binary classification.

bioRxiv · Mar 9, 2022Bioengineering

An integrative multi-omics approach points to membrane composition as a key factor in E. coli persistence

S. J. Canas-Duarte, L. Sun, M. I. Perez-Lopez, C. Herrfurth, L. M. Contreras, I. Feussner, C. Leidy, J. Paulsson, D. M. Riano-Pachon, J. M. Pedraza, S. Restrepo

This study identifies membrane composition changes as a key factor in E. coli persistence using genomic, transcriptomic, and lipidomic analyses of a high-persistence mutant.

bioRxiv · Aug 28, 2020Microbiology