Author

M. Carrasquilla

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

J. C. Rayner· 2 shared M. Lee· 2 shared T. Sanderson· 2 shared A. Knudson Ospina· 1 shared A. M. Early· 1 shared A. Pance· 1 shared A. R. Taylor· 1 shared C. O. Buckee· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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2 shared papersMicrobiology

J. C. Rayner

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Author profile →

4 papers

Recent·Most cited

Barcoding genetically distinct Plasmodium falciparum strains for comparative assessment of fitness and antimalarial drug resistance

M. Carrasquilla, N. F. Drammeh, M. Rawat, T. Sanderson, Z. Zenonos, J. C. Rayner, M. Lee

This paper introduces a method to assess fitness and drug resistance in Plasmodium falciparum strains using CRISPR/Cas9 and barcode sequencing, demonstrating its ability to detect artemisinin resistance in mixed parasite populations.

bioRxiv · Apr 5, 2022Microbiology

Resolving drug selection and migration in an inbred South American Plasmodium falciparum population with identity-by-descent analysis

M. Carrasquilla, A. M. Early, A. R. Taylor, A. Knudson Ospina, D. F. Echeverry, T. J. Anderson, E. Mancilla, S. Aponte, P. Cárdenas, C. O. Buckee, J. C. Rayner, F. E. Sáenz, D. E. Neafsey, V. Corredor

This study uses identity-by-descent analysis on whole-genome sequences from Plasmodium falciparum to examine drug resistance and population structure in a low-transmission, inbred population.

bioRxiv · Feb 18, 2022Evolutionary Biology

Quantitation of vector uptake reveals non-Poissonian transfection dynamics in Plasmodium falciparum

M. Carrasquilla, T. Sanderson, R. Montadon, J. Rayner, A. Pance, M. Lee

This study quantifies vector uptake in Plasmodium falciparum and finds non-Poissonian transfection dynamics, with parasites taking up multiple vectors early and unevenly.

bioRxiv · Jun 29, 2019 · PreprintMicrobiology

Capturing in vivo RNA transcriptional dynamics from the malaria parasite P. falciparum

H. J. Painter, M. Carrasquilla, M. Llinas

This paper develops a method to capture in vivo RNA transcriptional dynamics in Plasmodium falciparum by engineering parasites to salvage pyrimidines and label nascent mRNAs, revealing transcriptional reprogramming during gametocyte stage transition.

bioRxiv · Jan 12, 2017Microbiology