Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
8 papers
Recent·Most cited
T. Mouillaud, A. Berger, M. Buysse, N. Rahola, J. Daron, J.-P. Agbor, S. N. Nsango, D. E. Neafsey, O. Duron, D. Ayala
This study investigates whether Wolbachia infection in Anopheles moucheti mosquitoes affects Plasmodium falciparum infection, finding no correlation between Wolbachia density and parasite development.
bioRxiv · May 28, 2023 · PreprintMicrobiology
M. Carrasquilla, A. M. Early, A. R. Taylor, A. Knudson Ospina, D. F. Echeverry, T. J. Anderson, E. Mancilla, S. Aponte, P. Cárdenas, C. O. Buckee, J. C. Rayner, F. E. Sáenz, D. E. Neafsey, V. Corredor
This study uses identity-by-descent analysis on whole-genome sequences from Plasmodium falciparum to examine drug resistance and population structure in a low-transmission, inbred population.
bioRxiv · Feb 18, 2022Evolutionary Biology
L. E. Buyon, A. M. Santamaria, A. M. Early, M. Quijada, I. Barahona de Mosca, J. Lasso, M. Avila, S. K. Volkman, M. Marti, D. E. Neafsey, N. Obaldia
This study analyzes the population structure of Plasmodium vivax in Panama using genomic data to assess the risk of imported cases threatening malaria elimination.
PLOS Neglected Tropical Diseases · Dec 14, 2020Peer-reviewedMicrobiology
J. A. Tennessen, V. A. Ingham, K. H. Toe, W. M. Guelbeogo, N. Sagnon, R. Kuzma, H. Ranson, D. E. Neafsey
The paper identifies a new cryptic mosquito species within the Anopheles gambiae complex using whole-genome sequencing and presents a genotyping assay to detect it.
bioRxiv · May 26, 2020Evolutionary Biology
A. K. Bei, D. B. Larremore, K. Miura, A. Diouf, N. K. Baro, R. F. Daniels, A. Griggs, E. L. Moss, D. E. Neafsey, A. B. Deme, M. Sy, S. Schaffner, A. D. Ahouidi, D. Ndiaye, T. Dieye, , D. B. Wirth
The paper examines how changes in Plasmodium falciparum genetic complexity affect transcriptional profiles and immune recognition of genotypic clusters.
bioRxiv · Jan 3, 2020 · PreprintMicrobiology
A. M. Early, R. F. Daniels, T. M. Farrell, J. Grimsby, S. K. Volkman, D. F. Wirth, B. L. MacInnis, D. E. Neafsey
This paper evaluates four amplicon sequencing tools for detecting low-density Plasmodium falciparum infections, finding they can detect down to 5 genomes/l but have reduced accuracy at very low parasitemia.
bioRxiv · Feb 19, 2019Microbiology
N. B. Edelman, P. Frandsen, M. Miyagi, B. J. Clavijo, J. Davey, R. Dikow, G. Garcia Accinelli, S. M. Van Belleghem, N. J. Patterson, D. E. Neafsey, R. J. Challis, S. Kumar, G. R. P. Moreira, C. Salazar, M. Chouteau, , J. Mallet
The paper uses a low-cost genome assembly strategy to study Heliconius butterfly evolution, finding that introgression, not incomplete lineage sorting, explains most non-canonical genetic histories.
bioRxiv · Dec 4, 2018Evolutionary Biology
A. M. Early, M. Lievens, B. MacInnis, C. F. Ockenhouse, S. K. Volkman, S Clinical Trial Partnership Committee of Inve, RTS, D. F. Wirth, D. E. Neafsey
The paper analyzes intra-host diversity of Plasmodium falciparum antigens in sub-Saharan Africa to show host immunity influences which parasite strains progress to the blood stage.
bioRxiv · Nov 1, 2017Evolutionary Biology