Author

M. S. Gill

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Biophysics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:host-pathogen & immune response· 2 Organism:virus· 2 Assay:ATAC-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

M. Gilbert· 2 shared S. Dellicour· 2 shared A. A. Fisher· 1 shared A. Ayaz· 1 shared A. H. Paterson· 1 shared A. Mittal· 1 shared A. Sharma· 1 shared B. Vanmechelen· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersEvolutionary Biology

M. Gilbert

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Guava cv. Allahabad Safeda Chromosome scale assembly and comparative genomics decodes breeder choice marker trait association for pink pulp colour

A. Mittal, S. Thakur, A. Sharma, R. S. Boora, N. K. Arora, D. Singh, M. S. Gill, G. S. Dhillon, P. Chhuneja, I. Yadav, M. Jindal, O. K. Mathew, V. B. R. Lachagari, A. H. Paterson

The paper presents a chromosome-scale guava genome assembly and identifies a gene associated with pink pulp color through comparative genomics and marker-trait association analysis.

bioRxiv · Mar 29, 2024 · PreprintPlant Biology

Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing

S. Dellicour, S. Lequime, B. Vrancken, M. S. Gill, P. Bastide, K. Gangavarapu, N. L. Matteson, Y. Tan, L. du Plessis, A. A. Fisher, M. I. Nelson, M. Gilbert, M. A. Suchard, K. G. Andersen, N. D. Grubaugh, , P. Lemey

This study uses phylogeographic and phylodynamic methods to test hypotheses about West Nile virus dispersal and genetic diversity, finding temperature influences on spread and no strong evidence for migratory bird flyway restriction.

bioRxiv · Sep 19, 2020 · PreprintEvolutionary Biology

A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages

S. Dellicour, K. Durkin, S. L. Hong, B. Vanmechelen, J. Marti-Carreras, M. S. Gill, C. Meex, S. Bontems, E. Andre, M. Gilbert, C. Walker, N. De Maio, N. R. Faria, J. Hadfield, M.-P. Hayette, , P. Maes

This paper introduces a phylodynamic workflow to analyze SARS-CoV-2 lineage dispersal, showing external introductions were key in Belgium and lockdowns had limited impact on transmission.

bioRxiv · May 5, 2020Evolutionary Biology

Measuring cis-regulatory energetics in living cells using allelic manifolds

T. Forcier, A. Ayaz, M. S. Gill, D. Jones, R. Phillips, J. B. Kinney

The paper introduces a method to measure the Gibbs free energy of TF-DNA and TF-TF interactions in living cells using allelic manifolds and reporter assays, achieving precision of ~0.1 kcal/mol.

bioRxiv · Nov 19, 2018Biophysics