Author

K. Gangavarapu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Organism:virus· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

K. G. Andersen· 3 shared B. Vrancken· 2 shared M. A. Suchard· 2 shared N. D. Grubaugh· 2 shared N. L. Matteson· 2 shared P. Lemey· 2 shared S. Dellicour· 2 shared A. A. Fisher· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersEvolutionary Biology

K. G. Andersen

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Predicting the evolution of Lassa Virus endemic area and population at risk over the next decades

R. Klitting, L. E. Kafetzopoulou, W. Thiery, G. Dudas, S. Gryseels, A. Kotamarthi, B. Vrancken, K. Gangavarapu, M. Momoh, J. Demby Sandy, A. Goba, F. Alhasan, D. S. Grant, R. F. Garry, A. R. Smither, , S. Dellicour

The paper predicts that Lassa virus endemic areas will expand beyond West Africa due to environmental changes, increasing the population at risk from 100 million to 700 million by 2070.

bioRxiv · Sep 22, 2021Microbiology

Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing

S. Dellicour, S. Lequime, B. Vrancken, M. S. Gill, P. Bastide, K. Gangavarapu, N. L. Matteson, Y. Tan, L. du Plessis, A. A. Fisher, M. I. Nelson, M. Gilbert, M. A. Suchard, K. G. Andersen, N. D. Grubaugh, , P. Lemey

This study uses phylogeographic and phylodynamic methods to test hypotheses about West Nile virus dispersal and genetic diversity, finding temperature influences on spread and no strong evidence for migratory bird flyway restriction.

bioRxiv · Sep 19, 2020 · PreprintEvolutionary Biology

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar

N. D. Grubaugh, K. Gangavarapu, J. Quick, N. L. Matteson, J. Goes De Jesus, B. J. Main, A. L. Tan, L. M. Paul, D. E. Brackney, S. Grewal, N. Gurfield, K. K. Van Rompay, S. Isern, S. F. Michael, L. L. Coffey, , K. G. Andersen

The paper evaluates PrimalSeq for measuring intrahost virus diversity, showing how factors like sequencing coverage and primer mismatches affect accuracy.

bioRxiv · Aug 5, 2018Evolutionary Biology