Author

Mark Montine

University of Washington

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Caitlin S. LatimeriD· 2 shared Christine L. Mac DonaldiD· 2 shared Erica J. MeliefiD· 2 shared Mitchell D. KilgoreiD· 2 shared Adrià CasamitjanaiD· 1 shared Adrian Vasile DalcaiD· 1 shared Aimee M. SchantziD· 1 shared Amanda GaryiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Caitlin S. LatimerORCID

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Author profile →

2 papers

Recent·Most cited

Integrated multimodal cell atlas of Alzheimer's disease

Mariano I. Gabitto, Kyle J. Travaglini, Victoria M. Rachleff, Eitan S Kaplan, Brian Long, Jeanelle Ariza, Yi Ding, Joseph T. Mahoney, Nick Dee, Jeff Goldy, Erica J. Melief, Anamika Agrawal, Omar Z. Kana, Xingjian Zhen, Samuel T. Barlow, , Kimberly A. Smith

This study creates an integrated multimodal cell atlas of Alzheimer's disease by analyzing single nuclei transcriptomes, epigenomes, and spatial coordinates across AD stages.

Nature Neuroscience · Oct 14, 2024Peer-reviewedGenomics

Machine learning of dissection photographs and surface scanning for quantitative 3D neuropathology

Harshvardhan Gazula, Henry F. J. Tregidgo, Benjamin Billot, Yaël Balbastre, Jonathan Williams-Ramirez, Rogeny Herisse, Lucas J Deden-Binder, Adrià Casamitjana, Erica J. Melief, Caitlin S. Latimer, Mitchell D. Kilgore, Mark Montine, Eleanor Robinson, Emily Blackburn, Michael S Marshall, , Juan Eugenio Iglesias

The paper develops open-source tools for 3D analysis of brain dissection photographs and surface scans, achieving accurate reconstructions and segmentations comparable to MRI.

eLife · Dec 12, 2023Peer-reviewedNeuroscience