Author

Martin P. McHugh

University of St Andrews

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alistair Leanord· 1 shared Elzbieta Czarniak· 1 shared Jacqueline ToussaintiD· 1 shared Johanna von WachsmanniD· 1 shared John A. LeesiD· 1 shared Kate E. Templeton· 1 shared Kerry A. PettigrewiD· 1 shared Luke TysalliD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Alistair Leanord

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Integrated population clustering and genomic epidemiology with PopPIPE

Martin P. McHugh, Samuel Horsfield, Johanna von Wachsmann, Jacqueline Toussaint, Kerry A. Pettigrew, Elzbieta Czarniak, Thomas J. Evans, Alistair Leanord, Luke Tysall, Stephen H. Gillespie, Kate E. Templeton, Matthew T. G. Holden, Nicholas J. Croucher, John A. Lees

PopPIPE clusters bacterial populations and detects transmission events using reference-free methods, outperforming traditional approaches in nosocomial outbreak analysis.

Microbial Genomics · Apr 28, 2025Peer-reviewedBioinformatics