Author

Kate E. Templeton

Edinburgh Royal Infirmary

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander L. GreningeriD· 2 shared Amelia Weixler· 2 shared B. Ethan Nunley· 2 shared Goncalo Fernandes· 2 shared Hong Jian XieiD· 2 shared Jaydee SereewitiD· 2 shared Pavitra RoychoudhuryiD· 2 shared Rebecca DewariD· 2 shared

Activity by Year

2025-2025 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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2 shared papersGenomics

Alexander L. GreningerORCID

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Author profile →

3 papers

Recent·Most cited

ARTIC RSV amplicon sequencing reveals global RSV genotype dynamics.

Daniel M Maloney, Goncalo Fernandes, Seema Jasim, Tom G. S. Williams, Sarah B. Namugenyi, Michael J. Carr, J Meyer, Aryan Sharma, Louise Marshal, B. Ethan Nunley, Hong Jian Xie, Mateo Carvajal, Henry D. Kunerth, Arif Mohammad Tanmoy, Aine Niamh O’Toole, , Andrew Rambaut

This study introduces two novel amplicon sequencing schemes for RSV A and B, demonstrating their effectiveness in generating high-quality genomes globally and revealing minimal geographic clustering of RSV sequences.

Wellcome Open Research · Jun 25, 2025Peer-reviewedGenomics

Clinical performance evaluation of a tiling amplicon panel for whole genome sequencing of respiratory syncytial virus

B. Ethan Nunley, Amelia Weixler, Hyeong Geon Kim, Hong Jian Xie, Jaydee Sereewit, Pooneh Hajian, Sean Ellis, Margaret G. Mills, Ailyn C. Pérez-Osorio, Stephanie Goya, Jolene P. Gov, Rebecca Dewar, Goncalo Fernandes, Kate E. Templeton, Daniel M. Maloney, , Pavitra Roychoudhury

The paper evaluates a tiling amplicon panel for RSV whole genome sequencing, showing high sensitivity, specificity, and accuracy in clinical and contrived samples.

Journal of Molecular Diagnostics · Jun 19, 2025Peer-reviewedGenomics

Integrated population clustering and genomic epidemiology with PopPIPE

Martin P. McHugh, Samuel Horsfield, Johanna von Wachsmann, Jacqueline Toussaint, Kerry A. Pettigrew, Elzbieta Czarniak, Thomas J. Evans, Alistair Leanord, Luke Tysall, Stephen H. Gillespie, Kate E. Templeton, Matthew T. G. Holden, Nicholas J. Croucher, John A. Lees

PopPIPE clusters bacterial populations and detects transmission events using reference-free methods, outperforming traditional approaches in nosocomial outbreak analysis.

Microbial Genomics · Apr 28, 2025Peer-reviewedBioinformatics