Author

Mathieu Durand

Université de Sherbrooke

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:bulk RNA-seq· 3 Organism:human· 3 Research Focus:differential expression· 2 Research Focus:variant calling· 2 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Philippe ThibaultiD· 3 shared Danny BergeroniD· 2 shared Alex CarignaniD· 1 shared Alexandre Cloutier· 1 shared Ariane BraultiD· 1 shared Benoı̂t ChabotiD· 1 shared Elvy Lapointe· 1 shared Fiona Kessai· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersGenomics

Philippe ThibaultORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

NANOCUTSIGHT: A NANOPORE-SEQUENCING APPROACH AND ANALYSIS PIPELINE TO ASSESS GENOME EDITING EFFICACY IN VARIOUS CELL POPULATIONS

Danny Bergeron, Véronique Gaudreault, Maxime Duval, Sonya Nassari, François Boudreau, Mathieu Durand, Karine Choquet, Steve Jean

NanoCutSight is a nanopore sequencing pipeline to quantify indels and identify modification types in genome editing, benchmarked on guide RNAs in cell and organoid models.

bioRxiv · Sep 8, 2026 · PreprintBioinformatics

Splicing Isoforms Associated to TGFb-Induced Myofibroblast Activation

Opeoluwa Alli-Oke, Danny Bergeron, Fiona Kessai, Philippe Thibault, Mathieu Durand, Jean‐Philippe Brosseau

The paper identifies 5 alternative splicing events associated with TGFβ-induced myofibroblast activation using RNA-Seq and validates them in independent datasets.

BMC Molecular and Cell Biology · Mar 5, 2026Peer-reviewedGenomics

Detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in a fourplex real-time quantitative reverse transcription-PCR assays.

Mathieu Durand, Philippe Thibault, Simon Lévesque, Ariane Brault, Alex Carignan, Louis Valiquette, Philippe Martin, Simon Labbé

This study develops a fourplex rRT-PCR assay for detecting SARS-CoV-2 and its variants with mutations, showing high sensitivity and specificity for multiple viral targets.

Microbial Cell · Dec 28, 2021Peer-reviewedGenetic & Genomic Medicine

Transiently depleting RNPS1 leads to perdurable changes in alternative splicing

Jérôme Barbier, Alexandre Cloutier, Johanne Toutant, Mathieu Durand, Elvy Lapointe, Philippe Thibault, Benoı̂t Chabot

The paper shows that transient RNPS1 depletion causes perdurable changes in alternative splicing for RNPS1-regulated events, suggesting a role for splicing regulators in shaping transcript diversity.

bioRxiv · Jun 12, 2018 · PreprintMolecular Biology