Author

Matthew E. MacGilvray

University of Wisconsin–Madison

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:yeast· 2 Research Focus:benchmarking· 1 Organism:human· 1

Frequent Co-Authors

Anthony GitteriD· 2 shared Aaron McKennaiD· 1 shared Alejandro Wolf‐YadliniD· 1 shared Ali Sinan KöksaliD· 1 shared Audrey P. GaschiD· 1 shared Deborah A. ChasmaniD· 1 shared Dylan R. CroniniD· 1 shared Ernest FraenkeliD· 1 shared

Activity by Year

2018-2018 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Anthony GitterORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data

Ali Sinan Köksal, Kirsten Beck, Dylan R. Cronin, Aaron McKenna, Nathan D. Camp, Saurabh Srivastava, Matthew E. MacGilvray, Rastislav Bodík, Alejandro Wolf‐Yadlin, Ernest Fraenkel, Jasmin Fisher, Anthony Gitter

The paper introduces a computational method to identify missing signaling pathway elements from temporal phosphoproteomic data, demonstrating its effectiveness in both human EGF response and yeast osmotic stress response.

Cell Reports · Sep 1, 2018Peer-reviewedBioinformatics

Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

Matthew E. MacGilvray, Evgenia Shishkova, Deborah A. Chasman, Michael Place, Anthony Gitter, Joshua J. Coon, Audrey P. Gasch

The paper infers a signaling network regulating phosphorylation changes in yeast during salt stress, revealing novel interactions between stress and growth pathways.

PLoS Computational Biology · May 8, 2018Peer-reviewedSystems Biology