Author

Saurabh Srivastava

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 2 Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 4 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:protein structure prediction· 2 Approach:statistical model· 2

Frequent Co-Authors

Ajit P VarkiiD· 3 shared Andrea VerhageniD· 3 shared Aniruddha SasmaliD· 3 shared Hai YuiD· 3 shared Naazneen KhaniD· 3 shared Nissi M. VarkiiD· 3 shared Xi CheniD· 3 shared Zahra Khedri· 3 shared

Activity by Year

2018-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMolecular Biology

Ajit P VarkiORCID

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Author profile →

4 papers

Recent·Most cited

Simple and practical sialoglycan encoding system reveals vast diversity in nature and identifies a universal sialoglycan-recognizing probe derived from AB5 toxin B subunits

Aniruddha Sasmal, Naazneen Khan, Zahra Khedri, Benjamin P. Kellman, Saurabh Srivastava, Andrea Verhagen, Hai Yu, Anders Bech Bruntse, Sandra L. Diaz, Nissi M. Varki, Travis Beddoe, Adrienne W. Paton, James C. Paton, Xi Chen, Nathan E. Lewis, Ajit P Varki

The paper introduces a 9-digit code system for sialyltrisaccharides, revealing vast sialoglycan diversity and identifying a universal probe from AB5 toxin B subunits.

Glycobiology · Aug 26, 2022Peer-reviewedMicrobiology

Development and applications of sialoglycan-recognizing probes (SGRPs) with defined specificities: exploring the dynamic mammalian sialoglycome

Saurabh Srivastava, Andrea Verhagen, Aniruddha Sasmal, Brian R. Wasik, Sandra L. Diaz, Hai Yu, Barbara A. Bensing, Naazneen Khan, Zahra Khedri, Patrick Secrest, Paul M. Sullam, Nissi M. Varki, Xi Chen, Colin R. Parrish, Ajit P Varki

The paper develops sialoglycan-recognizing probes (SGRPs) to systematically study mammalian sialoglycome dynamics using established laboratory techniques.

Glycobiology · Aug 4, 2022Peer-reviewedMolecular Biology

Rapid evolution of bacterial AB5 toxin B subunits independent of A subunits: sialic acid binding preferences correlate with host range and toxicity

Naazneen Khan, Aniruddha Sasmal, Zahra Khedri, Patrick Secrest, Andrea Verhagen, Saurabh Srivastava, Nissi M. Varki, Xi Chen, Hai Yu, Travis Beddoe, Adrienne W. Paton, James C. Paton, Ajit P Varki

The paper shows bacterial AB5 toxin B subunits evolve rapidly and independently of A subunits, with sialic acid binding preferences linked to host range and toxicity.

bioRxiv · May 28, 2021 · PreprintMolecular Biology

Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data

Ali Sinan Köksal, Kirsten Beck, Dylan R. Cronin, Aaron McKenna, Nathan D. Camp, Saurabh Srivastava, Matthew E. MacGilvray, Rastislav Bodík, Alejandro Wolf‐Yadlin, Ernest Fraenkel, Jasmin Fisher, Anthony Gitter

The paper introduces a computational method to identify missing signaling pathway elements from temporal phosphoproteomic data, demonstrating its effectiveness in both human EGF response and yeast osmotic stress response.

Cell Reports · Sep 1, 2018Peer-reviewedBioinformatics