Quantitative insights into the efficacy of genome-resolved surveys of microbial communities through ribosomal protein phylogeography and EcoPhylo
Matthew S. Schechter, Florian Trigodet, Iva Veseli, Samuel E. Miller, Matthew L. Klein, Metehan Sever, Loïs Maignien, Tom O. Delmont, Samuel H. Light, A. Murat Eren
The paper introduces EcoPhylo, a computational workflow to assess genome recovery rates in microbial communities using ribosomal protein phylogeography, applied to human gut and oral cavity data.
bioRxiv · Jan 15, 2025 · PreprintMicrobiology