Author

Matthew S. Schechter

University of ChicagoORCID 0000-0002-8435-3203Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Approach:experimental assay· 2 Assay:metagenomics· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

A. Murat EreniD· 3 shared Iva VeseliiD· 3 shared Samuel E. MilleriD· 2 shared Christa B. SmithiD· 1 shared Florian TrigodetiD· 1 shared Laura WeberiD· 1 shared Lidimarie Trujillo RodrígueziD· 1 shared Loïs MaignieniD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

A. Murat ErenORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Proteobacteria with chemosynthetic potential are highly enriched in the gills of Hypoplectrus reef fishes

Sabrin Abdelghany, Martin Helmkampf, Matthew S. Schechter, Iva Veseli, Matthieu Leray, A. Murat Eren, Oscar Puebla

The study identifies chemosynthetic bacteria in the gills of Hypoplectrus reef fishes, revealing their metabolic potential and geographic distribution.

bioRxiv · Jul 1, 2025 · PreprintMicrobiology

Quantitative insights into the efficacy of genome-resolved surveys of microbial communities through ribosomal protein phylogeography and EcoPhylo

Matthew S. Schechter, Florian Trigodet, Iva Veseli, Samuel E. Miller, Matthew L. Klein, Metehan Sever, Loïs Maignien, Tom O. Delmont, Samuel H. Light, A. Murat Eren

The paper introduces EcoPhylo, a computational workflow to assess genome recovery rates in microbial communities using ribosomal protein phylogeography, applied to human gut and oral cavity data.

bioRxiv · Jan 15, 2025 · PreprintMicrobiology

Digital Microbe: A Genome-Informed Data Integration Framework for Collaborative Research on Emerging Model Organisms

Iva Veseli, Michelle A. DeMers, Zachary S. Cooper, Matthew S. Schechter, Samuel E. Miller, Laura Weber, Christa B. Smith, Lidimarie Trujillo Rodríguez, William F. Schroer, Matthew R. McIlvin, Paloma Lopez, Makoto Saito, Sonya T. Dyhrman, A. Murat Eren, Mary Ann Moran, Rogier Braakman

The paper introduces Digital Microbes, an integrative framework for collaborative research on microbes, demonstrating its application with two case studies involving genomic and transcriptomic data.

bioRxiv · Jan 16, 2024 · PreprintBioinformatics