Author

Milya Davlieva

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1

Frequent Co-Authors

Andrés Aranda-DíaziD· 2 shared Bienvenu NsengimaanaiD· 2 shared Bosco Bekiita AgabaiD· 2 shared Bryan GreenhouseiD· 2 shared Eric WatyekeleiD· 2 shared Francis D SemakubaiD· 2 shared Innocent WiringilimaanaiD· 2 shared Isaac SsewanyanaiD· 2 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Andrés Aranda-DíazORCID

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2 papers

Recent·Most cited

Whole-genome characterization of Plasmodium falciparum population structure and drug resistance across Uganda and neighboring countries

Shahiid Kiyaga, Monica Mbabazi, Thomas Katairo, Victor Asua, Francis D Semakuba, Bienvenu Nsengimaana, Stephen Tukwasibwe, Innocent Wiringilimaana, Jackie Nakasaanya, Jerry Mulondo, Eric Watyekele, Catherine Maiteki‐Sebuguzi, David Patrick Kateete, Joyce Nakatumba Nabende, Daudi Jjingo, , Jessica J. Briggs

The paper characterizes the population structure and drug resistance of Plasmodium falciparum in Uganda and neighboring countries using whole-genome data, identifying key resistance-associated haplotypes.

bioRxiv · Sep 30, 2026 · PreprintGenomics

PfPHAST: Plasmodium falciparum Public Health Amplicon Sequencing Tool, a Streamlined Panel for Malaria Genomic Surveillance

Francis D Semakuba, Bienvenu Nsengimaana, Monica Mbabazi, Thomas Katairo, Kathryn Murie, Nicholas J. Hathaway, Innocent Wiringilimaana, John Vester Muwanika, Kore Lum, Milya Davlieva, Victor Asua, Shahiid Kiyaga, Stephen Tukwasibwe, Jackie Nakasaanya, Karen B Achom, , Jessica J. Briggs

PfPHAST is a streamlined amplicon sequencing panel for malaria genomic surveillance, offering better quality control and cost efficiency than MAD4HatTeR without sacrificing performance on shared targets.

bioRxiv · Sep 29, 2026 · PreprintGenomics