Author

Natalia Koga

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:metabolomics· 1 Organism:mouse· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Anne RichelleiD· 2 shared Nathan E. LewisiD· 2 shared Alexia Movsessian· 1 shared Anders Bech Bruntse· 1 shared Angel Gezalyan· 1 shared Annalee FürstiD· 1 shared Athanasios AntonakoudisiD· 1 shared Austin W.T. ChiangiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersSystems Biology

Anne RichelleORCID

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2 papers

Recent·Most cited

A reconstruction of the mammalian secretory pathway identifies mechanisms regulating antibody production

Helen O. Masson, Jasmine Tat, Pablo Di Giusto, Athanasios Antonakoudis, Isaac Shamie, Hratch Baghdassarian, Mojtaba Samoudi, Caressa M. Robinson, Chih‐Chung Kuo, Natalia Koga, Sonia Singh, Angel Gezalyan, Zerong Li, Alexia Movsessian, Anne Richelle, Nathan E. Lewis

The paper presents secRecon, a comprehensive secretory pathway reconstruction, and uses it to identify secretory differences in plasma cells and CHO cells, highlighting potential targets for improving secretion capacity.

Cell Systems · Dec 1, 2025Peer-reviewedSystems Biology

Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration

Benjamin P. Kellman, Anne Richelle, Jeong‐Yeh Yang, Digantkumar Gopaldas Chapla, Austin W.T. Chiang, Julia A. Najera, Chenguang Liang, Annalee Fürst, Bokan Bao, Natalia Koga, Mahmoud Ali Mohammad, Anders Bech Bruntse, Morey W. Haymond, Kelley W. Moremen, Lars Bode, Nathan E. Lewis

The paper constructs an HMO biosynthesis network using multi-omics integration to predict glycosyltransferases and propose candidate genes for HMO synthesis pathways.

Nature Communications · May 4, 2022Peer-reviewedSystems Biology