Author

P. A. Pevzner

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Immunology· 2

Signature Assays, Organisms & Methods

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Research Focus:clustering· 4 Approach:statistical model· 4 Research Focus:cell type annotation· 3 Approach:deep learning· 3 Organism:human· 3 Assay:metagenomics· 3 Assay:scRNA-seq· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

D. Antipov· 2 shared E. V. Koonin· 2 shared N. Yutin· 2 shared S. A. Shmakov· 2 shared S. B. Shin· 2 shared S. Benler· 2 shared Y. Safonova· 2 shared A. B. Gussow· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersMicrobiology

D. Antipov

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Author profile →

5 papers

Recent·Most cited

Revealing how variations in antibody repertoires correlate with vaccine responses

Y. Safonova, S. B. Shin, L. Kramer, J. Reecy, C. T. Watson, T. P. L. Smith, P. A. Pevzner

The paper analyzes antibody repertoire variations in vaccinated calves to identify genetic factors influencing vaccine efficacy against bovine respiratory disease.

bioRxiv · Aug 6, 2021Immunology

Generation of lineage-resolved complete metagenome-assembled genomes by precision phasing

D. M. Bickhart, M. Kolmogorov, E. Tseng, D. Portik, A. Korobeynikov, I. Tolstoganov, G. Uritskiy, I. Liachko, S. T. Sullivan, S. B. Shin, A. Zorea, V. P. Andreu, K. Panke-Buisse, M. H. Medema, I. Mizrahi, , T. P. Smith

The paper generates lineage-resolved complete MAGs using HiFi reads from sheep fecal samples, achieving high-resolution deconvolution of microbial communities.

bioRxiv · May 4, 2021 · PreprintMicrobiology

Thousands of previously unknown phages discovered in whole-community human gut metagenomes

S. Benler, N. Yutin, D. Antipov, M. Raykov, S. A. Shmakov, A. B. Gussow, P. A. Pevzner, E. V. Koonin

The paper identifies 3,738 new phage genomes from human gut metagenomes, classifying them into three new candidate families and revealing novel phage-host interaction mechanisms.

bioRxiv · Oct 7, 2020Microbiology

Unique genomic features of crAss-like phages, the dominant component of the human gut virome

N. Yutin, S. Benler, S. A. Shmakov, Y. I. Wolf, I. Tolstoy, M. Rayko, D. Antipov, P. A. Pevzner, E. V. Koonin

The paper identifies nearly 600 crAss-like phage genomes from human gut microbiomes, revealing unique genomic features and anti-defense mechanisms.

bioRxiv · Jul 20, 2020 · PreprintMicrobiology

IgEvolution: clonal analysis of antibody repertoires

Y. Safonova, P. A. Pevzner

IgEvolution constructs antibody repertoires and clonal trees together, improving accuracy by identifying mutable positions linked to antigen-binding sites.

bioRxiv · Aug 27, 2019 · PreprintImmunology