Author

P. Trairatphisan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Pharmacology & Toxicology· 3

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Organism:rat· 2 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

J. L. Stevens· 3 shared B. van de Water· 2 shared G. Callegaro· 2 shared J. J. Sutherland· 2 shared J. Saez-Rodriguez· 2 shared L. S. Wijaya· 2 shared S. J. Kunnen· 2 shared B. v. d. Water· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersPharmacology & Toxicology

J. L. Stevens

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3 papers

Recent·Most cited

Utilizing gene co-expression networks with the rat kidney TXG-MAPr tool to enhance safety assessment, biomarker identification and human translation

S. J. Kunnen, G. Callegaro, J. J. Sutherland, P. Trairatphisan, H. van Kessel, L. S. Wijaya, G. Chung, K. Pye, K. M. Goldstein, C. R. Teague, C. P. Fisher, J. Saez-Rodriguez, C. Brown, S. A. Elmore, K. M. Heinz-Taheny, , B. van de Water

This study builds gene co-expression networks from rat kidney toxicogenomics data and integrates them into a web tool to improve safety assessment and biomarker identification for drug development.

bioRxiv · Nov 3, 2023 · PreprintPharmacology & Toxicology

Spatio-temporal transcriptomic analysis reveals distinct nephrotoxicity, DNA damage and regeneration response after cisplatin

L. S. Wijaya, S. Kunnen, P. Trairatphisan, C. Fisher, M. Crosby, K. Schaefer, K. Bodie, E. Vaughan, L. Breidenbach, T. Reich, D. Clausznitzer, S. A. Bonnet, S. Zheng, C. Pont, J. L. Stevens, , B. v. d. Water

This study uses spatial transcriptomics to analyze cisplatin-induced nephrotoxicity and regeneration in different kidney segments, identifying distinct molecular responses and biomarkers.

bioRxiv · Jan 3, 2023Pharmacology & Toxicology

The human hepatocyte TXG-MAPr: WGCNA transcriptomic modules to support mechanism-based risk assessment

G. Callegaro, S. J. Kunnen, P. Trairatphisan, S. Grosdidier, M. Niemeijer, W. den Hollander, E. Guney, J. P. Gonzalez, L. Furlong, Y. W. Webster, J. Saez-Rodriguez, J. J. Sutherland, J. Mollon, J. L. Stevens, B. van de Water

The paper introduces TXG-MAPr, a tool for analyzing toxicogenomic data using WGCNA to identify stress response modules across species and platforms.

Archives of Toxicology · Oct 9, 2021Peer-reviewedPharmacology & Toxicology