Author

Pavel Tomancak

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Developmental Biology· 2 Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Organism:Drosophila· 2 Approach:experimental assay· 2 Assay:imaging· 2 Approach:statistical model· 2 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Helena Jambor· 2 shared Alex T Kalinka· 1 shared Alex T. Kalinka· 1 shared Anne Zakrzewski· 1 shared Bettina Stender· 1 shared Christopher Schmied· 1 shared Chritiane Barz· 1 shared Dana Suchold· 1 shared

Activity by Year

2013-2016 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Helena Jambor

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Light sheet microscopy for everyone? Experience of building an OpenSPIM to study flatworm development

Johannes Girstmair, Anne Zakrzewski, François Lapraz, Mette Handberg-Thorsager, Pavel Tomancak, Peter Gabriel Pitrone, Fraser Simpson, Maximilian J Telford

The paper describes building and using an OpenSPIM microscope to study flatworm development, highlighting its capabilities and challenges in live imaging.

BMC Developmental Biology · Jun 30, 2016Peer-reviewedDevelopmental Biology

A genome-wide resource for the analysis of protein localisation in Drosophila

Mihail Sarov, Chritiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay K.J. Vikas, R.T. Krisnan, K. Aishwarya, Irene R.S. Ferreira, Radoslaw K. Ejsmont, Katja Finkl, Susanne Hasse, , Frank Schnorrer

This paper presents a genome-wide fosmid library of GFP-tagged Drosophila genes to study protein expression and localisation across developmental stages.

bioRxiv · Oct 4, 2015Genomics

Systematic Imaging Reveals Features of Localized mRNAs and Their Changing Subcellular Destinations in Development

Helena Jambor, Vineeth Surendranath, Alex T. Kalinka, Pavel Mejstrik, Stephan Saalfeld, Pavel Tomancak

The paper uses transcriptomics and imaging to study mRNA localization in Drosophila oogenesis, revealing widespread localization, dependence on microtubules, and differences between localized and unlocalized mRNAs.

bioRxiv · Nov 4, 2014Developmental Biology

An Adaptive Threshold in Mammalian Neocortical Evolution

Eric Lewitus, Iva Kelava, Alex T Kalinka, Pavel Tomancak, Wieland B Huttner

The paper identifies a neuronal threshold of ~109 neurons required for highly folded neocortex evolution, showing bimodal trait distributions and a genomic correlate in non-coding RNA conservation.

bioRxiv · Dec 16, 2013Evolutionary Biology