Author

Peter Van Buren

Cold Spring Harbor Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Doreen WareiD· 3 shared Liya WangiD· 3 shared Michael Regulski· 2 shared Alexander DobiniD· 1 shared Andrew J. OlsoniD· 1 shared Bo WangiD· 1 shared Carlos Ortiz‐RamíreziD· 1 shared Cornel Ghiban· 1 shared

Activity by Year

2015-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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3 shared papersBioinformatics

Doreen WareORCID

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Author profile →

3 papers

Recent·Most cited

Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud

Liya Wang, Zhenyuan Lu, Melissa delaBastide, Peter Van Buren, Xiaofei Wang, Cornel Ghiban, Michael Regulski, Jörg Drenkow, Xiaosa Xu, Carlos Ortiz‐Ramírez, Cristina Fernandez Marco, Sara Goodwin, Alexander Dobin, Kenneth D. Birnbaum, David P. Jackson, , T Gingeras

The paper describes the development of a cloud-based platform for managing, analyzing, and distributing MaizeCODE data, enhancing reproducibility and accessibility.

Frontiers in Plant Science · Mar 31, 2020Peer-reviewedBioinformatics

Variant Phasing and Haplotypic Expression from Single-molecule Long-read Sequencing in Maize

Bo Wang, Elizabeth Tseng, Primo A. Baybayan, Kevin Eng, Michael Regulski, Yinping Jiao, Liya Wang, Andrew J. Olson, Kapeel M. Chougule, Peter Van Buren, Doreen Ware

The paper develops a tool for haplotype phasing and expression analysis in maize using single-molecule long-read sequencing, revealing allele-specific and imprinted gene expression.

Communications Biology · Feb 18, 2020Peer-reviewedBioinformatics

Architecting a distributed bioinformatics platform with iRODS and iPlant Agave API

Liya Wang, Peter Van Buren, Doreen Ware

The paper proposes a distributed bioinformatics platform using iRODS and iPlant Agave API for genomic analysis, validated with a Genome-Wide Association Study workflow.

bioRxiv · Dec 15, 2015 · PreprintBioinformatics