Alleviating cell-free DNA sequencing biases with optimal transport
Antoine Passemiers, Tatjana Jatsenko, Adriaan Vanderstichele, Pieter Busschaert, An Coosemans, Dirk Timmerman, Diether Lambrechts, Daniele Raimondi, Joris Robert Vermeesch, Yves Moreau
This paper introduces an optimal transport-based domain adaptation method to correct technical biases in cfDNA sequencing data, improving cancer detection and enabling cohort integration.
bioRxiv · Apr 4, 2024 · PreprintBioinformatics