Author

R. Dizerens

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 4

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Assay:bulk RNA-seq· 2 Research Focus:cell-cell communication· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Assay:scRNA-seq· 2

Frequent Co-Authors

A. Agrafiotis· 4 shared A. Oxenius· 4 shared A. Yermanos· 4 shared D. Shlesinger· 4 shared K.-L. Hong· 4 shared R. Kuhn· 4 shared S. T. Reddy· 4 shared M. Manero-Carranza· 3 shared

Activity by Year

2021-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersImmunology

A. Agrafiotis

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

ePlatypus: an ecosystem for computational analysis of immunogenomics data

V. Kreiner, A. Agrafiotis, T.-S. Cotet, R. Kuhn, D. Shlesinger, M. Manero-Carranza, K. Khodaverdi, S. Masserey, L. Guerci, K.-L. Hong, J. Han, K. Stiklioraitis, V. Martinolli, R. Dizerens, S. Kilchenmann, , A. Yermanos

ePlatypus provides a computational ecosystem for immunogenomics data analysis, integrating diverse modalities and tools to study adaptive immunity and computational immunology.

bioRxiv · Sep 28, 2022 · PreprintImmunology

Persistent virus-specific and clonally expanded antibody secreting cells respond to induced self antigen in the CNS

A. Agrafiotis, R. Dizerens, I. Vincenti, I. Wagner, R. Kuhn, D. Shlesinger, M. Manero-Carranza, T.-S. Cotet, K.-L. Hong, N. Page, N. Fonta, G. Shammas, A. Mariotte, M. Piccinno, M. Kreutzfeldt, , A. Yermanos

The paper identifies virus-specific, clonally expanded antibody-secreting cells in the CNS that persist and respond to induced self-antigen, with parallels in multiple sclerosis patients.

bioRxiv · Aug 29, 2022Immunology

Single-cell immune repertoire sequencing of B and T cells in murine models of infection and autoimmunity

D. Shlesinger, K.-L. Hong, G. Shammas, N. Page, I. Sandu, A. Agrafiotis, V. Kreiner, N. Fonta, I. Vincenti, I. Wagner, M. Piccinno, A. Mariotte, B. Klimek, R. Dizerens, M. Manero-Carranza, , A. Yermanos

The paper profiles clonal selection of B and T cells in murine models of infection and autoimmunity using single-cell sequencing, linking repertoire features to cell phenotypes.

bioRxiv · Feb 7, 2022Immunology

Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes

J. Han, R. Kuhn, C. Papadopoulou, A. Agrafiotis, V. Kreiner, D. Shlesinger, R. Dizerens, K.-L. Hong, C. Weber, V. Greiff, A. Oxenius, S. T. Reddy, A. Yermanos

Echidna simulates single-cell immune receptor repertoires and transcriptomes, enabling benchmarking of clonotyping and phylogenetic analysis tools.

bioRxiv · Jul 17, 2021Immunology