Author

T.-S. Cotet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Immunology· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Agrafiotis· 3 shared A. Oxenius· 3 shared A. Yermanos· 3 shared K.-L. Hong· 3 shared R. Kuhn· 3 shared S. T. Reddy· 3 shared D. Laslo· 2 shared D. Shlesinger· 2 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersImmunology

A. Agrafiotis

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

ePlatypus: an ecosystem for computational analysis of immunogenomics data

V. Kreiner, A. Agrafiotis, T.-S. Cotet, R. Kuhn, D. Shlesinger, M. Manero-Carranza, K. Khodaverdi, S. Masserey, L. Guerci, K.-L. Hong, J. Han, K. Stiklioraitis, V. Martinolli, R. Dizerens, S. Kilchenmann, , A. Yermanos

ePlatypus provides a computational ecosystem for immunogenomics data analysis, integrating diverse modalities and tools to study adaptive immunity and computational immunology.

bioRxiv · Sep 28, 2022 · PreprintImmunology

Persistent virus-specific and clonally expanded antibody secreting cells respond to induced self antigen in the CNS

A. Agrafiotis, R. Dizerens, I. Vincenti, I. Wagner, R. Kuhn, D. Shlesinger, M. Manero-Carranza, T.-S. Cotet, K.-L. Hong, N. Page, N. Fonta, G. Shammas, A. Mariotte, M. Piccinno, M. Kreutzfeldt, , A. Yermanos

The paper identifies virus-specific, clonally expanded antibody-secreting cells in the CNS that persist and respond to induced self-antigen, with parallels in multiple sclerosis patients.

bioRxiv · Aug 29, 2022Immunology

Generation of a single-cell B cell atlas of antibody repertoires and transcriptomes to identify signatures associated with antigen-specificity

A. Agrafiotis, D. Neumeier, K.-L. Hong, T. Chowdhury, R. A. Ehling, R. Kuhn, I. Sandu, V. Kreiner, T.-S. Cotet, D. Laslo, S. Anzböck, D. Starkie, D. J. Lightwood, A. Oxenius, S. T. Reddy, A. Yermanos

The paper generates a single-cell B cell atlas to link antibody repertoires, transcriptomes, and antigen specificity in murine immunization models.

bioRxiv · Nov 9, 2021Immunology