Author

S. B. Dixit

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Organism:C. elegans· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Approach:genetic perturbation / CRISPR· 1 Approach:graph neural network· 1 Research Focus:protein design· 1 Research Focus:protein folding & dynamics· 1 Assay:protein structure· 1

Frequent Co-Authors

A. Kadan· 1 shared A. Mukhopadhyay· 1 shared B. D. Grant· 1 shared B. McMaster· 1 shared J. L. McWhirter· 1 shared N. Ratnakaran· 1 shared S. Hegde· 1 shared S. P. Koushika· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBiochemistry

A. Kadan

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Author profile →

2 papers

Recent·Most cited

ZymePackNet: rotamer-sampling free graph neural network method for protein sidechain prediction

A. Mukhopadhyay, A. Kadan, B. McMaster, J. L. McWhirter, S. B. Dixit

ZymePackNet predicts protein sidechain conformations using a graph neural network without requiring rotamer libraries or energy functions, achieving high accuracy in dihedral angle prediction.

bioRxiv · May 5, 2023 · PreprintBiochemistry

Active zone protein SYD-2/Liprin-α acts downstream of LRK-1/LRRK2 to regulate polarized trafficking of synaptic vesicle precursors through clathrin adaptor protein complexes

S. S. P. Nadiminti, S. B. Dixit, N. Ratnakaran, S. Hegde, S. Swords, B. D. Grant, S. P. Koushika

This study identifies SYD-2/Liprin-α as a downstream effector of LRK-1/LRRK2 that regulates polarized trafficking of synaptic vesicle precursors through AP-3 and AP-1 complexes in C. elegans neurons.

bioRxiv · Feb 26, 2023 · PreprintCell Biology