Author

S. J. White

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Physiology· 2 Biochemistry· 1 Biophysics· 1 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Organism:non-human primate· 2 Organism:bacteria (other)· 1 Assay:cryo-EM· 1 Approach:deep learning· 1

Frequent Co-Authors

A. C. Newby· 1 shared A. Downey-Wall· 1 shared A. Huet· 1 shared A. J. Grimmer· 1 shared A. J. Wilson· 1 shared A. J. Young· 1 shared A. Keshmiri· 1 shared A. Langford-Smith· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 7 mutual co-author links

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1 shared paperCell Biology

A. C. Newby

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Author profile →

6 papers

Recent·Most cited

Coral long-term recovery after bleaching: implications for sexual reproduction and physiology.

J. Padilla-Gamino, E. Timmins-Schiffman, E. Lenz, S. J. White, J. Axworthy, A. Potter, J. Lopez, F. Wang

This study examines long-term effects of coral bleaching on reproduction and physiology of Montipora capitata, finding distinct transcriptomic responses and reproductive impacts between bleached and non-bleached colonies.

bioRxiv · Apr 9, 2024 · PreprintPhysiology

DNA methylation correlates with transcriptional noise in response to elevated pCO2 in the eastern oyster (Crassostrea virginica)

Y. R. Venkataraman, A. S. Huffmyer, S. J. White, A. Downey-Wall, J. Ashey, D. M. Becker, Z. Bengtsson, H. M. Putnam, E. Strand, J. A. Rodriguez-Casariego, S. A. Wanamaker, K. E. Lotterhos, S. Roberts

This study examines how DNA methylation and gene expression respond to elevated pCO2 in eastern oysters, finding sex-specific effects on transcriptional noise and gene regulation.

bioRxiv · Apr 4, 2024 · PreprintPhysiology

A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability

J. M. Podgorski, K. Freeman, S. Gosselin, A. Huet, J. F. Conway, M. Bird, J. Grecco, S. Patel, D. Jacobs-Sera, G. Hatfull, J. P. Gogarten, J. Ravantti, S. J. White

The paper constructs a structural dendrogram of actinobacteriophage major capsid proteins to explore the evolution of capsid stability using cryo-EM, phylogenetic analysis, and AlphaFold predictions.

bioRxiv · Sep 9, 2022Biochemistry

Genetic integration of behavioural and endocrine components of the stress response

T. M. Houslay, R. L. Earley, S. J. White, W. Lammers, A. J. Grimmer, L. Travers, E. Johnson, A. J. Young, A. J. Wilson

This study shows that acute stress response traits in Trinidadian guppies are heritable and genetically integrated, suggesting potential for artificial selection to improve health and welfare in captive populations.

bioRxiv · Jan 10, 2022Evolutionary Biology

Modeling Coronavirus Spike Protein Dynamics: Implications for Immunogenicity and Immune Escape

G. Kunkel, M. Madani, S. J. White, P. Verardi, A. Tarakanova

This paper develops computational models of SARS-CoV-2 Spike protein dynamics to analyze structural variability, antibody binding, and immune escape mechanisms, offering insights for vaccine design and variant prediction.

bioRxiv · Aug 19, 2021Biophysics

A pivotal role for Nrf2 in endothelial detachment- implications for endothelial erosion of stenotic plaques

S. Satta, M. McElroy, A. Langford-Smith, G. Ferris, J. E. Teasdale, Y. Kim, G. Niccoli, A. T. Tanjeko, J. Serre, G. G. Hazell, G. Sala Newby, P. Wang, J. L. Johnson, M. J. Humphries, G. Gayan-Ramirez, , S. J. White

This study shows that Nrf2 activation under elevated flow and smoking induces endothelial detachment, contributing to atherosclerotic plaque erosion and acute coronary syndromes.

bioRxiv · Feb 1, 2019Cell Biology