Author

S. P. Castillo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Y. Yuan· 2 shared A. M. Boddy· 1 shared A. Pöysti· 1 shared C. Garcia-Diaz· 1 shared C. Palmieri· 1 shared D. Corcoran· 1 shared E. Kusch· 1 shared E. Mereu· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersCancer Biology

Y. Yuan

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

AI-powered pan-species computational pathology: bridging clinic and wildlife care

K. AbdulJabbar, S. P. Castillo, K. Hughes, H. Davidson, A. M. Boddy, L. M. Abegglen, E. P. Murchinson, T. A. Graham, S. Spiro, C. Palmieri, Y. Yuan

This study develops a pan-species computational pathology atlas using AI to analyze cancer morphology across species, finding that accuracy varies with morphological similarity and introduces a new metric for veterinary applications.

bioRxiv · Mar 5, 2022 · PreprintCancer Biology

Glioblastoma cell fate is differentially regulated by the microenvironments of the tumour bulk and infiltrative margin

C. Garcia-Diaz, E. Mereu, M. P. Clements, A. Pöysti, F. Galvez-Cancino, S. P. Castillo, L. Courtot, S. Ruiz, F. Roncaroli, Y. Yuan, S. A. Quezada, H. Heyn, S. Parrinello

This study compares glioblastoma cell fate in tumour bulk and margin, finding distinct neurogenic patterns and immune environments, with margin cells showing developmental-like trajectories and iNPCs linked to interferon signalling.

bioRxiv · Jun 11, 2021 · PreprintCancer Biology

NetworkExtinction: an R package to simulate extinction's propagation and rewiring potential in ecological networks

M. I. Avila-Thieme, D. Corcoran, E. Kusch, S. P. Castillo, F. S. Valdovinos, S. A. Navarrete, P. A. Marquet

NetworkExtinction simulates extinction propagation and rewiring in ecological networks, quantifying robustness and secondary extinctions in response to species loss.

bioRxiv · Oct 17, 2020Ecology