Author

S. R. Lindemann

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:cell type annotation· 5 Organism:human· 5 Assay:metagenomics· 4 Assay:metabolomics· 2 Research Focus:host-pathogen & immune response· 1 Research Focus:metabolism & bioenergetics· 1

Frequent Co-Authors

T. Yao· 4 shared M.-H. Chen· 3 shared D. G. Deemer· 2 shared A. D. Romero Marcia· 1 shared A. Fricker· 1 shared B. L. Reuhs· 1 shared B. R. Hamaker· 1 shared B. R. Morton· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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4 shared papersMicrobiology

T. Yao

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Author profile →

6 papers

Recent·Most cited

Interindividual Diversity of Human Gut Mucin-Degrading Microbial Consortia

A. Fricker, T. Yao, S. R. Lindemann, G. E. Flores

The paper examines interindividual differences in human gut microbial communities capable of degrading mucin, finding taxonomic variation but functional redundancy in mucin metabolism.

bioRxiv · May 13, 2023 · PreprintMicrobiology

Botanicals impact the bifidogenic effect and metabolic outputs of in vitro fiber fermentation by gut-derived microbiota in individual-specific ways

D. G. Deemer, N. Voreades, P. A. Bron, S. R. Lindemann

The paper examines how botanicals in a functional soda blend affect fiber fermentation by gut microbiota, showing donor-specific interactions that enhance bifidogenic effects and short-chain fatty acid production.

bioRxiv · Apr 17, 2023Microbiology

SUBTLE DIFFERENCES IN FINE POLYSACCHARIDE STRUCTURES GOVERN SELECTION AND SUCCESSION OF HUMAN GUT MICROBIOTA

T. Yao, D. G. Deemer, M.-H. Chen, B. L. Reuhs, B. R. Hamaker, S. R. Lindemann

The paper investigates how subtle differences in polysaccharide structures influence microbial community assembly and metabolic responses in human gut microbiota using in vitro fermentation and multi-omics analysis.

bioRxiv · Oct 4, 2022 · PreprintMicrobiology

Fine carbohydrate structure governs the structure and function of human gut microbiota independently of variation in glycosyl residue composition

A. D. Romero Marcia, T. Yao, M.-H. Chen, R. E. Oles, S. R. Lindemann

This study shows that fine carbohydrate linkage structure, not sugar composition, drives gut microbiota composition and function across individuals.

bioRxiv · Apr 22, 2021 · PreprintMicrobiology

Carbohydrate complexity structures stable diversity in gut-derived microbial consortia under high dilution pressure

T. Yao, M.-H. Chen, S. R. Lindemann

This study shows that complex carbohydrates sustain microbial diversity better than simpler ones under dilution pressure, with structural complexity shaping community composition more than metabolic interactions.

bioRxiv · Jan 31, 2020 · PreprintMicrobiology

MetFish: A Metabolomics Platform for Studying Microbial Communities in Chemically Extreme Environments

C. Xu, S. P. Couvillion, R. L. Sontag, N. G. Isern, Y. Maezato, S. R. Lindemann, T. Roy Chowdhury, R. Zhao, B. R. Morton, R. J. Moore, J. K. Jansson, V. L. Bailey, P. J. Mouser, M. F. Romine, J. F. Fredrickson, T. O. Metz

MetFish enables LC-MS-based exo-metabolomics analysis in hypersaline samples, quantifying metabolites with high sensitivity and reproducibility in various environments.

bioRxiv · Jan 11, 2019 · PreprintMicrobiology