Author

S. Tamim

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5

Signature Assays, Organisms & Methods

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Organism:plant (other)· 4 Research Focus:chromatin & epigenetic regulation· 3 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

B. C. Meyers· 5 shared C. Teng· 3 shared P. Baldrich· 2 shared S. Mathioni· 2 shared A. Dawson· 1 shared A. Dusia· 1 shared A. Luo· 1 shared A. W. Sylvester· 1 shared

Activity by Year

2018-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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5 shared papersPlant Biology

B. C. Meyers

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5 papers

Recent·Most cited

The Evolutionary History of Small RNAs in the Solanaceae

P. Baldrich, S. Belanger, S. Kong, S. Pokhrel, S. Tamim, C. Teng, C. Schiebout, S. G. R. Gurazada, P. Gupta, P. Patel, H. Razifard, M. Nakano, A. Dusia, B. C. Meyers, M. Frank

The paper uses over 255 small RNA datasets to characterize the small RNA landscape across the Solanaceae family, revealing dynamic evolutionary patterns and genus-specific similarities.

bioRxiv · May 26, 2021Plant Biology

A transposon surveillance mechanism that safeguards plant male fertility during stress

J. Gutierrez-Marcos, Y.-S. Lee, R. Maple, J. Durr, A. Dawson, S. Tamim, B. C. Meyers, C. del Genio, R. Papareddy, A. Luo, J. Lamb, A. W. Sylvester, J. A. Birchler, M. D. Nodine, J. Rouster

This study identifies two Argonaute-like proteins essential for maintaining male fertility in maize under high temperatures by controlling retrotransposon activity.

bioRxiv · Oct 3, 2020Plant Biology

Ligation bias is a major contributor to nonstoichiometric abundances of secondary siRNAs and impacts analyses of microRNAs

P. Baldrich, S. Tamim, S. Mathioni, B. C. Meyers

The paper evaluates small RNA library construction methods in plants, showing that ligation bias affects secondary siRNA abundances and microRNA analysis.

bioRxiv · Sep 14, 2020 · PreprintPlant Biology

Environment-conditioned male fertility of HD-ZIP IV transcription factor mutant ocl4: impact on 21-nt phasiRNA accumulation in pre-meiotic maize anthers

P. Yadava, S. Tamim, H. Zhang, C. Teng, X. Zhou, B. C. Meyers, V. Walbot

The paper investigates how the HD-ZIP IV transcription factor mutant ocl4 affects 21-nt phasiRNA accumulation in maize anthers under different environmental conditions, finding that these phasiRNAs buffer development under stress.

bioRxiv · Jun 30, 2020Plant Biology

Cis-directed cleavage and nonstoichiometric abundances of 21-nt reproductive phasiRNAs in grasses

S. Tamim, Z. Cai, S. Mathioni, J. Zhai, C. Teng, Q. Zhang, B. C. Meyers

The paper characterizes 21-nt reproductive phasiRNAs in grasses, showing cis-directed cleavage and nonstoichiometric abundance patterns in rice and maize.

bioRxiv · Mar 17, 2018Plant Biology